| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0871 |
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| Symbol | |
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| ID | 6242369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 970823 |
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| End bp | 972508 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642592645 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001857106 |
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| Protein GI | 186475636 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000448288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.420997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTCA TCTTTTGCGC GTTGTTGGTC CTGACGCTCG CCGCATGCGC GAGCCAGGGG
CCTACGACGA ATAGCCTTAC CACTGCTTCC AATCCCGCTA GCCAGCAAGC CGTAGCCGAC
GCCCTCCGCA AGACCGCCAC CGCCAAAGAA ACCATCAACG TCGACCAGGG TTCCGTCGAC
CAGTTGACGA GCGCAGACAG CGATCTTTGG GGCCGTATCC GTCGTGGTTT CCAGATGCCG
GACCTGCAAA GCGACCTCGT CGACATGCAG GCGAACTGGT ACGCGCAGCG CCCGGATTAC
GTGCAGCGCA TGACCGAACG GTCGCAGAAG TACCTGTACC ACATCGTCGA AGAACTCGAA
GCGCGCCACA TGCCGACGGA GCTCGCGCTG CTGCCGTTCA TCGAATCCGC GTACAACCCG
CAGGCGCTGT CTGTCGCGAA GGCGGCAGGC ATGTGGCAGT TCGTGCCGGG CACGGGCCGA
ACGTACAACC TCAAGCAGAA CATGTGGCAG GACGAACGCC GCGACGTGCT CGCGTCCACC
AGTGCCGCGC TCGACTATCT GTCGCGCCTG CACGATATGT TCGGCGACTG GTATCTGGCG
CTCGCCGCGT ACAACTGGGG CGAGGGCAAC GTGCAGCGCG CGATCGCGCG CAACGAAGCC
GCCGGTCTGC CGACGGACTA CCAGAGCCTG CGCATGCCGA TGGAAACGCG CAACTACGTG
CCGAAGTTGC AGGCGGTGAA GAACATCGTG GCGAACCCGC AGGTCTACGG GCTCACGCTG
CCGTCCATTC CGAACCACCC GTACTTCGTC ACCGTCACGA CGTCGCACGA TATCGACGTC
GACACGGCGG CGAAGCTTGC GAACATGACG CCGGACGAAT TCCGTTCGCT GAATCCGTCG
TTCAAGAAAC CGGTCATTCT CGGCGCGACG CAGCCGCAGA TTCTGCTGCC GTTCGACAAT
GCCAGCGCCT TCGAGCGCAA CCTGAAGTCT TACTCGGGCT CGCTGTCGTC ATGGACGACC
TATACGGTCA CCGAGCGCAG TCGTCCCGCC GCGATCGCCG AAAAGATCGG TGTCGACGCC
GATACGCTGA TGGCCGTGAA CAAGATTCCG GCGGGCATGC GCCTGAAGCC GGGTTCGACG
ATCGTCGTGC CGCGCGCCGA TGACGACGAC GAAGACATCA GCGCCGACGT TGCCGAAAGC
GCCACGCTAG CGATGGAGCC AGACGTGCCC GACACGCGCA AGATGCTGAT TCGCGTGCGT
CGCAAGCAGT CGATGGCGGT GCTGGCCGAT CGCTACGATG TGTCGATCGG TCAGTTGAAG
GCTTGGAACC GCACCAGGCG CGACGTGGTG ATGCCGGGTC AGGTCGTCGT GCTGCACGTG
CCCGTCGGCA AGGCGATGCC GAGCGAGCCG GGCCCGCAGA AGCTGGCCAC GGTGCCCGTC
GGCGGTGGCG TGGAGAAGGC CGGCGCCCAG ATCGCGGATA CGCATTCTGA ATCGCGCTAC
GATAAGAAGC GAGGCCGCGG CCACACTGGC ATGGTCAAAG TGTCGGAACC GGTCGGCAAG
ACCGACAAGC CCGCTCCCGC AAAAGGCAAG GTGACGAAGG TTTCGACGGA AGCGGCTGGC
AAGGCGTCGA AGGCGGAGAC GGGCAGCCAC CACAAGGTCT CGGCCAGCGC GAAGAAGAGC
AAGTAA
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| Protein sequence | MRFIFCALLV LTLAACASQG PTTNSLTTAS NPASQQAVAD ALRKTATAKE TINVDQGSVD
QLTSADSDLW GRIRRGFQMP DLQSDLVDMQ ANWYAQRPDY VQRMTERSQK YLYHIVEELE
ARHMPTELAL LPFIESAYNP QALSVAKAAG MWQFVPGTGR TYNLKQNMWQ DERRDVLAST
SAALDYLSRL HDMFGDWYLA LAAYNWGEGN VQRAIARNEA AGLPTDYQSL RMPMETRNYV
PKLQAVKNIV ANPQVYGLTL PSIPNHPYFV TVTTSHDIDV DTAAKLANMT PDEFRSLNPS
FKKPVILGAT QPQILLPFDN ASAFERNLKS YSGSLSSWTT YTVTERSRPA AIAEKIGVDA
DTLMAVNKIP AGMRLKPGST IVVPRADDDD EDISADVAES ATLAMEPDVP DTRKMLIRVR
RKQSMAVLAD RYDVSIGQLK AWNRTRRDVV MPGQVVVLHV PVGKAMPSEP GPQKLATVPV
GGGVEKAGAQ IADTHSESRY DKKRGRGHTG MVKVSEPVGK TDKPAPAKGK VTKVSTEAAG
KASKAETGSH HKVSASAKKS K
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