Gene Bphy_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0858 
Symbol 
ID6242356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp956492 
End bp957241 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID642592631 
ProductHAD family hydrolase 
Protein accessionYP_001857093 
Protein GI186475623 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAC TTCCCGCTTT TCTGTCTCCG ACGGAGACGG CTTTTTTCTT CGATTTCGAC 
GGCACGCTCG TCGATCTGGC ACCGACACCC GATGGCGTAC TCGTGCAGCC GGAGGCGGTC
GCGTTGCTCG CCGAATTGCG GCGTCTGACC AACGGCGCGG TGGCGATCCT CTCGGGTCGG
GGCATCGACA GCATCGACCA GTTTCTCGGC ATGCCCGATC TGCCCATCGC GGGTTTGCAC
GGCGCCGAAC GGCGCGACGC GAACGGCGAC ACGCAGCGCA TCGGCTTCAA CGACGAGCGG
CTGCTGCGCA TGGAGCAGGT GCTCGCGGAC ATCGTCAATG CGAATCCCGG CATGCTGCTC
GAAATCAAGG GCGCGGCGCT TGCCTTGCAC TATCGCAATG CGCCCGATCG CGAGCCGGTT
GCACGTGAAG CCACCACGCG CCTGGTCGCC GACTATCCGG AAGCATATGT GTTGCAGCCG
GGCAAGATGG TCTACGAAAT CAAACCAAAG GATGTCGATA AAGGCCGCGC GCTGCGCGCC
TTTCTCGACG AGCCGCCGTT TACAGGCCGC ACGCCCATTT TCGCCGGCGA CGATCTCACC
GACGAAAAAG GCTTCGCGGT CGTCAACGAC CACGGCGGTC TGTCGATCAA GGTCGGCAGC
GGCGACACGA TCGCACGCTC GCGCATCGGC TCGGTGAGTG CGCTGCTCGC GTGGCTGTCC
GAAATCGTCG CGGCGGCACG CAGCGCATGA
 
Protein sequence
MQALPAFLSP TETAFFFDFD GTLVDLAPTP DGVLVQPEAV ALLAELRRLT NGAVAILSGR 
GIDSIDQFLG MPDLPIAGLH GAERRDANGD TQRIGFNDER LLRMEQVLAD IVNANPGMLL
EIKGAALALH YRNAPDREPV AREATTRLVA DYPEAYVLQP GKMVYEIKPK DVDKGRALRA
FLDEPPFTGR TPIFAGDDLT DEKGFAVVND HGGLSIKVGS GDTIARSRIG SVSALLAWLS
EIVAAARSA