| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0834 |
|---|
| Symbol | |
|---|
| ID | 6242332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 932864 |
|---|
| End bp | 933463 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642592604 |
|---|
| Product | RNA polymerase sigma factor RpoE |
|---|
| Protein accession | YP_001857069 |
|---|
| Protein GI | 186475599 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAAA AAGAAATAGA TCAGGTGCTG GTTGAACGCG TTCAGAACGG CGACAAGGCC
GCGTTCGAGC TTCTGGTCTC AAAGTACCAC CGCAAGATCA TCCGGCTGAT CTCGCGCCTC
GTGCGGGATC CTGCCGAGGT CGAGGACGTG GCCCAGGATG CCTTCATCAA GGCATACCGG
GCGCTGCCCC AATTCCGCGG CGAGTCCGCG TTCTATACGT GGTTGTACCG TATTGCCGTC
AATACGGCCA AGAATTACCT TGCGACCCAA GGCCGGCGAG CGCCCACTTC GACGGAAGCA
GATGCTGAAG AAGCGGAAAC TTTCTCGGAT GCCGACCAAC TAAGGGATAT CAACACGCCC
GAGTCGATGT TGATGAGCAA ACAGATCGCT GAGACGGTCA ATGCTGCGAT GGCGGTTTTA
CCGGAAGAGC TGCGCACCGC CATAACTCTT CGTGAAATTG AAGGTCTGAG CTACGAGGAA
ATCGCCGAGA TGATGGGCTG CCCAATCGGC ACCGTCAGAT CGAGAATTTT CCGCGCTCGC
GAGGCCATTG CGGCAAAATT GCGTCCGCTG CTTGACACAC CCGAAGGCAA GCGCTGGTAG
|
|---|
| Protein sequence | MSEKEIDQVL VERVQNGDKA AFELLVSKYH RKIIRLISRL VRDPAEVEDV AQDAFIKAYR
ALPQFRGESA FYTWLYRIAV NTAKNYLATQ GRRAPTSTEA DAEEAETFSD ADQLRDINTP
ESMLMSKQIA ETVNAAMAVL PEELRTAITL REIEGLSYEE IAEMMGCPIG TVRSRIFRAR
EAIAAKLRPL LDTPEGKRW
|
|---|
| |