| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0819 |
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| Symbol | |
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| ID | 6242317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 920449 |
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| End bp | 921510 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642592589 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001857054 |
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| Protein GI | 186475584 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0956515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGT TAGGCAAAAT ATCCCAGAAA TCGGTGACGG GTGTCGCTGG CGATCAGGTT
TCGATGCTCG AAATCGACGA CAGTGCGGCC GGTCAGCGGA TCGACAATTT CCTGTTGCGC
GTCTGTAAGG GCGTGCCGAA AAGCCACATA TACCGGATTC TGCGCAGCGG GGAAGTGCGC
GTAAACAAAG GGCGGGTCGA TGCGCAGTAT CGGCTGGCTC ACGGCGATCT GGTGCGTGTG
CCCCCCATCC GCATCGCAAA AAGCGATGAG CCGGCGCATG CACTGGCGCC GTCCGCGCAT
TTCGACATCC TGTTCGAGGA CGACCATCTG CTTGTGATCG ACAAGCCGGC GGGAGTAGCC
GTTCACGGGG GCAGCGGCGT CGCGTTCGGC GTGATCGAGC AATTGCGCGC GGCGCGCCCG
CAGGCAAAGT TCCTCGAACT GGTGCATCGG CTGGACCGCG AAACCTCGGG CGTACTGATG
CTCGCGAAAA AGCGCGCGGC GCTCGTCAAT CTTCACGAGC AGATTCGCGA AAACAGGATG
GACAAACGCT ACTACGCATG CGTGCACGGC GAGTGGGCGA GCGACTGGGG CCGCCGGCGC
GCGGTGAAGG AGCCGCTGCA CAAGTATTTG CTGCCAGATG GCGAGCGGCG CGTGCGCGTG
CAGCCGGACG GCCTGCCATC GCACACGGTT TTCAATCTGA TCGAGCGTTG GCCGGACTAC
GCGCTGCTGG AGGCGGAACT GAAAACGGGC CGGACTCATC AGATTCGAGT CCATCTGGCG
CACCTGGGGT TACCCATCGT CGGCGACGCC AAGTATGGCG ATTTCGCACT GAACAAGGCG
CTTGCGCGTG CGAACGCGAA TCTCGGCCTC AAGCGCATGT TCCTGCATGC ATACAGGCTT
AAACTGACGC ATCCGGCATC AGGACAGACG GTGCAGTTCG ATGCGCCGTT GCCGGCGGAG
TGCAAGCGTT TCCTCGCGCA GCTCGCCGAA ATGGCTGGCC GGACGGCGGA GCACACACAA
TCACATAACG AGACGGGAAC GCATGGCTCG ACAGCAATTT GA
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| Protein sequence | MKELGKISQK SVTGVAGDQV SMLEIDDSAA GQRIDNFLLR VCKGVPKSHI YRILRSGEVR
VNKGRVDAQY RLAHGDLVRV PPIRIAKSDE PAHALAPSAH FDILFEDDHL LVIDKPAGVA
VHGGSGVAFG VIEQLRAARP QAKFLELVHR LDRETSGVLM LAKKRAALVN LHEQIRENRM
DKRYYACVHG EWASDWGRRR AVKEPLHKYL LPDGERRVRV QPDGLPSHTV FNLIERWPDY
ALLEAELKTG RTHQIRVHLA HLGLPIVGDA KYGDFALNKA LARANANLGL KRMFLHAYRL
KLTHPASGQT VQFDAPLPAE CKRFLAQLAE MAGRTAEHTQ SHNETGTHGS TAI
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