| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0749 |
|---|
| Symbol | |
|---|
| ID | 6242247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 844987 |
|---|
| End bp | 846162 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642592517 |
|---|
| Product | tetratricopeptide repeat protein |
|---|
| Protein accession | YP_001856984 |
|---|
| Protein GI | 186475514 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0880031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTAG ACCTCTGGTG GCTGCTCGTC ATACCCGTCG CATTCGCGTT CGGCTGGGTG
GCTGCGCGCT ACGACCTGAA GGCGCTGCTT TCCGAAAGCG CCAACCTGCC GCGCTCTTAT
TTCCGCGGCC TGAACTTTCT GTTAAACGAG CAACCGGACC AGGCTATCGA CGCCTTCATC
GAAGTCGTCA AGCTCGATCC CGAAACGATC GAGCTGCACT TCGCGCTCGG CAATCTGTTT
CGGCGCCGCG GCGAAACGGA TCGGGCGATC CGCGTGCACC AGAACCTGCT AAGTCGCGCC
GACTTACCCG TTACCGAGCG CGATCACGCG TTGTTCGAAC TGGGACAGGA CTTCCTGAAG
GCTGGCCTTC TGGACCGCGC GGAAGAGACG TTCAATGCGC TCGAATCGGG CGATTACGCG
CTTGGCGCCC AGCGGGCGCT GCTTACCATC TACCAGATCG AGAAGGACTG GAACAAATCG
ATCGATACCG CTCGCCGGCT CGAGACGATG GGCGCGGCGT CGCTCGACAA GGAAATCGGC
CACTTTCATT GCGAGCTGGC GCAGGAGGCG CTACAGCAGA AGAAGTCGGA CGAGTCCCGT
CGCCAGCTGG AGCTGGCGCT GAAGGCACAT CCGCAGAACG TGCGCGCGAC GATCCTGTTC
GGCGATGTCG ATGCCGCGGC CGGCCAGTAC GAGGCGGCAA TCGCGCAATG GCTGCGTGTC
GAGGAACAGA ACCCGGCGTA TCTGCCCCTC GTCGCCGAAA AGCTGACGAA GGCGTACGAG
GCGCTGGGTC GTGCGGAAGA GGGCGCCGAC CTGCTGACGA CATGGGTGGA CCGTTATCCG
TCGAACGATC TGCTCGACGT CGCGTATCAG CACGTGTCGG CGCTGCGGGG TCCTGAAGCG
GCCCACGCGC TCGCGCGCAC GCAGATGCAA AAGTCCCCGA ATCTCGCGGG CATGACGCGT
CTGCTCGAAG CGCAGCAGGC GGTGGCCGAG GAGCCGCGCC GCAGCGAACT GGAACTGATG
CGCACGTTGA TCCGTCAGCG CACCAAGAAC CTGCCGCGTT ACACGTGCCA GAATTGCGGC
TTCCGGGCGC GACTTTTCTA TTGGCAGTGT CCGGGATGCA GCGGCTGGGA AACCTATGCG
CCACGCCGCG TCGAGCCCAT CACGGCGTCG AGTTGA
|
|---|
| Protein sequence | MDLDLWWLLV IPVAFAFGWV AARYDLKALL SESANLPRSY FRGLNFLLNE QPDQAIDAFI
EVVKLDPETI ELHFALGNLF RRRGETDRAI RVHQNLLSRA DLPVTERDHA LFELGQDFLK
AGLLDRAEET FNALESGDYA LGAQRALLTI YQIEKDWNKS IDTARRLETM GAASLDKEIG
HFHCELAQEA LQQKKSDESR RQLELALKAH PQNVRATILF GDVDAAAGQY EAAIAQWLRV
EEQNPAYLPL VAEKLTKAYE ALGRAEEGAD LLTTWVDRYP SNDLLDVAYQ HVSALRGPEA
AHALARTQMQ KSPNLAGMTR LLEAQQAVAE EPRRSELELM RTLIRQRTKN LPRYTCQNCG
FRARLFYWQC PGCSGWETYA PRRVEPITAS S
|
|---|
| |