| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0727 |
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| Symbol | |
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| ID | 6242225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 819634 |
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| End bp | 822573 |
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| Gene Length | 2940 bp |
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| Protein Length | 979 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642592495 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001856962 |
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| Protein GI | 186475492 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0216931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.398444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATC CGATCACTTT CCAATCCGGC GGCTGCGGCT CCGGCAACTG CGCCTGCAAG
GCAGGCGCGC TGCGCAATGA ACGCGGTCCG TTCGACGACA CCGACTACGG CACGCCGTTG
CGTCATTCCG ACGTCGACGT GACGCTCGAA ATCGACGGCC AGGCGATCAC AGTGCCCGCG
GGCACGTCGG TGATGCGCGC GGCCGCCGAA GCCGGGGTCA ACATTCCGAA GTTGTGCGCG
ACCGATTCGC TCGAACCGTT CGGCTCGTGC CGCCTGTGTC TCGTCGAAAT CGAAGGCCGC
CGCGGTTATC CCGCGTCGTG CACCACGCCT GTCGAAGCGG GCATGAAGGT GCGCACACAG
ACGGATCGCC TGCAAGGACT GCGCCGCAAT GTGATGGAGC TGTACATCTC CGATCACCCG
CTCGACTGTC TCACCTGCCC CGCCAACGGC AACTGCGAAC TGCAGGACAT GGCGGGCGTC
ACGGGCCTGC GCGAAGTGCG CTATGGCTTC GACGGCGCGA ATCACCTGAA GGATCAGAAG
GACGAGTCGA ATCCGTACTT CACGTACGAC CCGTCCAAGT GCATCGTCTG CAACCGCTGC
GTGCGCGCGT GCGAAGAAAC GCAAGGCACG TTCGCACTGA CCATCTCGGG ACGCGGCTTC
GAATCGCGCG TCGCCGCGAG CGAAAGCCAG CCGTTCATGG AATCCGAATG CGTGTCGTGC
GGCGCGTGCG TCGCGGCATG CCCGACGGCC ACGCTGTCCG AAAAGAGCAT TGTGATGATG
GGCCAGGGCG AGCATTCCGT CGTGACGACC TGCGCGTACT GTGGCGTCGG CTGCTCGTTC
AAGGCCGAGA TGAAGGGCAA CACGGTCGTG CGGATGGTGC CGCACAAGAA CGGCCAGGCC
AACGAAGGCC ACGCTTGCGT GAAGGGCCGT TTTGCATGGG GCTACGCGAC GCATAAGGAC
CGCATCAAGA AGCCGATGAT CCGCGCGAAG ATCACCGATC CGTGGCGCGA AGTGAGCTGG
GAAGAAGCGC TCAGCTACGC GGCATCGGAA TTCCGCCGCA TCCAGGACAA GTACGGCCGC
GATTCGATCG GCGGCATCAC GTCGTCGCGC TGCACGAACG AAGAAACGTA TCTCGTGCAG
AAGCTCGTGC GTGCCGCGTT CGGCAACAAC AACGTCGACA CCTGCGCACG CGTGTGCCAC
TCGCCGACAG GCTACGGCCT GAAGACGACG CTCGGCGAAT CGGCGGGTAC GCAGACCTTC
GCTTCCGTCG ACCAGTCCGA CGTGATCATC GTGATCGGTG CAAACCCGAC GGACGGCCAC
CCGGTGTTCG GCTCGCGTCT GAAGCGCCGT GTGCGCCAGG GCGCGAAACT GATCGTGATC
GATCCGCGCC GCATCGATAT TGTCGATACA GCGCACGTGA AGGCCCAATA CCATCTGCAA
CTGCGTCCGG GCACGAACGT CGCGATGGTC ACGTCGCTCG CGCATGTGAT CGTCACGGAA
GGCCTGCTCG ACGAGTCGTT CATTGCCGAG CGCTGCGAGA CCCGCGCATT CGGCCACTGG
CGCGATTTCG TGTCGCTGCC GGAAAACTCG CCGGAGATGA TGGAAAGCGT GACGGGCGTG
CCGGCTCAGC AGGTGCGCGA AGCCGCGCGC CTGTACGCGA CGGGCGGCAA CGCGGCAATC
TACTACGGCC TCGGCGTGAC GGAACACGCG CAGGGCTCGA CGACCGTGAT GGGCATCGCG
AACCTCGCGA TGGCGACGGG CAACATCGGC CGCGAAGGTG TCGGCGTGAA TCCGCTGCGC
GGCCAGAACA ACGTGCAGGG CTCGTGCGAC ATGGGCTCGT TCCCGCACGA ACTGCCGGGC
TACCGCCATA TCAGCGACAC CGTTACTCGC ACGCTGTTCG AAGGGGAATG GGGCGTCACC
CTGCAGCCGG AACCGGGCCT GCGCATTCCG AACATGTTCG ACGCCGCCGT TCATGGCAGC
TTCAAGGGCC TGTACTGCCA GGGCGAAGAC ATCGTACAGT CCGACCCGAA TACGCAGCAT
GTGGGCGCCG CGCTGTCGTC GATGGAATGC ATCGTCGTGC AGGACATCTT CCTGAACGAA
ACCGCGAAGT ATGCACACGT GCTGCTGCCG GGTTCGACCT TCCTCGAGAA GGACGGCACC
TTTACGAACG CGGAGCGCCG CATCTCGCGC GTGCGCAAGG TGATGCCGCC GCTCGCCGGC
TACGCCGACT GGGAAGTGAC GATCCTGCTC GCCCGCGCGC TCGGCTACGA GATGAACTAC
GCGCATCCGT CGCAGATCAT GGACGAGATC GCGCGACTCA CGCCGACTTT CCACGGCGTG
TCGTACGAGA AGCTCGACAA GCTGGGCAGC ATCCAGTGGC CGTGCAACGA GCATGCACCG
GAAGGCACGC CGACGATGCA CATCGACGAG TTCGTGCGCG GCAAGGGCAA ATTCGTGATC
ACGAAGTACG TCGCGACGCC CGAAAAGGTC AACCAGAAGT TCCCGCTGAT CCTGACGACG
GGCCGCATCC TGTCGCAGTA CAACGTCGGC GCGCAGACGC GGCGCACGGA AAACTCGCGC
TGGCACGAGG AAGATCGTCT GGAAATCCAT CCGCACGACG CCGAAGACCG CGGCATCAAG
GACGACGACT GGGTGGGCAT CGAGTCGCGC GCGGGCTACA CCGTGCTGCG CGCGAAGGTG
GCGGACCGGA TGCAGCCGGG CGTCGTCTAC ACCACGTTCC ACTTCCCGGA ATCGGGCGCG
AACGTGATCA CGACGGACAG TTCCGACTGG GCGACCAACT GCCCCGAGTA CAAGGTCACG
GCCGTGCAGG TGATGCCCGT CGAGCAGCCG TCGCAATGGC AAAAGGACTA TTCGCGCTTC
AACAACGAAC AGCTCGAGCA TCTGAGCAAT CGCGAGCTGG CCGCTACTTC AGGCAAATAA
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| Protein sequence | MSDPITFQSG GCGSGNCACK AGALRNERGP FDDTDYGTPL RHSDVDVTLE IDGQAITVPA
GTSVMRAAAE AGVNIPKLCA TDSLEPFGSC RLCLVEIEGR RGYPASCTTP VEAGMKVRTQ
TDRLQGLRRN VMELYISDHP LDCLTCPANG NCELQDMAGV TGLREVRYGF DGANHLKDQK
DESNPYFTYD PSKCIVCNRC VRACEETQGT FALTISGRGF ESRVAASESQ PFMESECVSC
GACVAACPTA TLSEKSIVMM GQGEHSVVTT CAYCGVGCSF KAEMKGNTVV RMVPHKNGQA
NEGHACVKGR FAWGYATHKD RIKKPMIRAK ITDPWREVSW EEALSYAASE FRRIQDKYGR
DSIGGITSSR CTNEETYLVQ KLVRAAFGNN NVDTCARVCH SPTGYGLKTT LGESAGTQTF
ASVDQSDVII VIGANPTDGH PVFGSRLKRR VRQGAKLIVI DPRRIDIVDT AHVKAQYHLQ
LRPGTNVAMV TSLAHVIVTE GLLDESFIAE RCETRAFGHW RDFVSLPENS PEMMESVTGV
PAQQVREAAR LYATGGNAAI YYGLGVTEHA QGSTTVMGIA NLAMATGNIG REGVGVNPLR
GQNNVQGSCD MGSFPHELPG YRHISDTVTR TLFEGEWGVT LQPEPGLRIP NMFDAAVHGS
FKGLYCQGED IVQSDPNTQH VGAALSSMEC IVVQDIFLNE TAKYAHVLLP GSTFLEKDGT
FTNAERRISR VRKVMPPLAG YADWEVTILL ARALGYEMNY AHPSQIMDEI ARLTPTFHGV
SYEKLDKLGS IQWPCNEHAP EGTPTMHIDE FVRGKGKFVI TKYVATPEKV NQKFPLILTT
GRILSQYNVG AQTRRTENSR WHEEDRLEIH PHDAEDRGIK DDDWVGIESR AGYTVLRAKV
ADRMQPGVVY TTFHFPESGA NVITTDSSDW ATNCPEYKVT AVQVMPVEQP SQWQKDYSRF
NNEQLEHLSN RELAATSGK
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