Gene Bphy_0722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0722 
Symbol 
ID6242220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp814002 
End bp815849 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content68% 
IMG OID642592490 
ProductTPR repeat-containing protein 
Protein accessionYP_001856957 
Protein GI186475487 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.434562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCAG TTTTCGACCG CGCGTATAGC GCGCATCGTG ACGGCCGGCT CGACGACGCC 
GAGCGCGGCT ATCGCGCCAC CCTCGATCTC GATCCCGCTC ACGTCGACGC GCTGCATCTG
CTCGGCGTGC TGCGCCATCA GCAAGGCCAG CACGAGGAAG CGGCCGACCT CGTGCGCCGC
GCTGCCGACT TGCGCCCGCA AGATGCCGCG TTGCAGCTGA ACCTCGGCAA TGCGCTGAAG
GCGCTCGGCC GTCTCGACCA GGCAATCGAA CGCTTTCGCA ATGCGCTGAC GCTCGCGCCG
ACGTTTCCGA TGGCGCACTA CAACCTGGGC AACGCGTACG CGCTCGCGGG GCGCCATGAA
GACGCCGTCG ATGCGTTCCA GAAGTCGCTG CGCCTGCAGC CGATGGACGC GTCGTCACAC
GTCAATCTCG GCAACGCGCT GCATGCGTTG GGCAGGCACC GTGAAGCGGC CGATTCGTTC
CGGCGCGCGC TCGAACTGCG GCCCGGCCAT GCGGGCGCGC ACAACAACAT GGGCATGGCG
CTCAACGCGC TCGGTTCCGC GACGGAGGCA GGCGCCCATT TCCGCGCGGC GCTGAAGATT
GAGCCGCGCT TCGTCGCCGC GCGTTTCAAC CTCGCCAATA CACTCGACGC GACGGGTCAG
CATGAACAGG CCGTCACGGA GTTCGAAGCG GTCCTTGCGA TGCAGTCGAG CTTGCCGCCC
GCTTTGTTCG GCCTCGGTAA CGCGCTCGCG TCGCTTGGCC GTCATGCAGA AGCGCGGCCG
CGTTTCGAAC GCGCCGTTGG TCTTGATCCG GCCTTTGCGC TCGCGTGGCT GAGCCTCGGC
GCCGCGCATC ACGCGCTCGG CGCGCACGAC GCTGCCGTGC GCGCTTTCGA CCAGGCATTG
CGTCTGCGTC CCGATCTGCC GATGGCGCAT ATGAATCGCG GCGTCGCGCT GCTCACGCTG
GGCGACTTCA AGCGTGGACT GCCGGAATAT GAATGGCGGC TGGAAAACGC GGCCGCGGCG
CCGGACGCGA CGGCGCTGCC GCGCTGGAAC GGCGAGCCGA TCGAAGGAAA GACGTTGTTC
CTGCACGCCG AGCAGGGTTT CGGGGACACG CTGCAATTCG TGCGTTTCGT CGAACAGGTG
GCGGGACGCG CCGTGCGGAT CGTACTTGAA GTGCAGCCGC AGCTCTTGTC CTTGCTCGCG
CCGACAGCGG AACAATGGCG CGTCACGCTG ATACCGCAAG GCGCGCCGCG GCCGCGCGCC
GATTTGCAGT GCCCGCTGCT GAGCCTGCCA TTCGCACTCG GCACGGAACT CGACACGATT
CCGGCACGCA CGCCTTATCT GCAAGCACCC GCCGCGTCCC GCCGCACGTG GCGCGGCTCG
CTCGGCGGGC ACGCGAAGCG CAAGCTCGGC CTCGCGTGGT CAGGACGCGC GCAGCGTCAG
GAGAATCGCT CGCTGCCGCT CGCTGCGCTC GAGCCGCTGT TCGCGCTCGC CGGCATCGAC
TGGATCGTGC TGCAGCCCTC GCTCACCGAC GAAGAACGCG CCGCGCTCGA TCGGCATCCG
CGCGCGAAGA ACATCCATCG CTTCGACGGG CGCATTCGCG ACTTCGCCGA CACGGCGGCC
ATTATCGAGC GGCTGGATGG CGTGGTGTCG GTCGATACGG CGATTGCGCA CCTGACGGGC
GCGCTCGGCA AGCCGCTTTG GCTGATGCTG CCGTTCGCGG CCGACTGGCG CTGGTTCACG
GACAATCGAA GCAGCCCGTG GTATCCGTCC GCGCGCCTCG TGCGGCAGCC CCGGCCGGGC
GCATGGCAGG AAGTCGTCGA AGACGTGGCG GCGGCGCTGC GCGCGTGA
 
Protein sequence
MHPVFDRAYS AHRDGRLDDA ERGYRATLDL DPAHVDALHL LGVLRHQQGQ HEEAADLVRR 
AADLRPQDAA LQLNLGNALK ALGRLDQAIE RFRNALTLAP TFPMAHYNLG NAYALAGRHE
DAVDAFQKSL RLQPMDASSH VNLGNALHAL GRHREAADSF RRALELRPGH AGAHNNMGMA
LNALGSATEA GAHFRAALKI EPRFVAARFN LANTLDATGQ HEQAVTEFEA VLAMQSSLPP
ALFGLGNALA SLGRHAEARP RFERAVGLDP AFALAWLSLG AAHHALGAHD AAVRAFDQAL
RLRPDLPMAH MNRGVALLTL GDFKRGLPEY EWRLENAAAA PDATALPRWN GEPIEGKTLF
LHAEQGFGDT LQFVRFVEQV AGRAVRIVLE VQPQLLSLLA PTAEQWRVTL IPQGAPRPRA
DLQCPLLSLP FALGTELDTI PARTPYLQAP AASRRTWRGS LGGHAKRKLG LAWSGRAQRQ
ENRSLPLAAL EPLFALAGID WIVLQPSLTD EERAALDRHP RAKNIHRFDG RIRDFADTAA
IIERLDGVVS VDTAIAHLTG ALGKPLWLML PFAADWRWFT DNRSSPWYPS ARLVRQPRPG
AWQEVVEDVA AALRA