| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0677 |
|---|
| Symbol | |
|---|
| ID | 6242176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 762698 |
|---|
| End bp | 763876 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642592445 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_001856913 |
|---|
| Protein GI | 186475443 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.566846 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAC CGTTTCTGTC CGAGCCTGCC CTCGATGTGC CAATTGTTTT CGTCGACCTT
GAAACCACGG GGGGCTCTGT CGGCGATCAT AGAATCACGG AAGTCGGCGT CGTCGAAGTG
GGACCGAATG GTGTGTCCAG CTGGACTACG CTGGTCGACC CCGGTCAGCC CATCCCGCCA
TTCATCCAGC AATTGACGGG CATCACCAAC GACATGGTGC GCGGTGCGCC GACGTTCGAA
GCCATTGCCG CCGACCTGTT CGCGCGGCTC GACGGCAAGC TTTTCATCGC GCACAACGCG
AGCTTCGATC GCGGTTTCCT GCGCAGCGAG TTTCAGCGAG CCGGTTTCGC GTTCAATCCC
GACGTACTGT GCACCGTGCG CCTCTCGCGG GCGCTGTTTC CCGCCGAAAA GCGCCACGGC
CTCGACGCGC TCGTCGAGCG GCACGCACTC ATGCCGTCAG ACCGGCACCG CGCGCTCGCC
GACGCCGATC TGCTCTGGCA GTTCTGGCAG CGCCTGCACG GCCTCGTACC CGTCGACGTG
CTGCGCGCGC AGATCGACAA GACCATGCGC CGTTTCCGGC TGGCGGGCGA TATCACGGAA
GACCTGATCG ATACGGCGCC TGCCGGTTGC GGCGTATATG CGTTCTATGG CGAGAGCGAC
GCGCCGCTCT ATGTAGGACG GAGCGTGCGC GTGCGTCAGC GGTTGCGGTC GCATCTGACG
GGCGAACGCC GTTCGTCGAA AGAGATGAAG CTTGCGCAGC AAGTGCGCCG CGTCGAATGG
CGCGCGACGG GCGGCGAGAT CGGCGCTCTG CTCGCCGAAG CCCAACTGAT CGCCGCGCTG
CGGCCGCCGA ACAACCGCGT GCCGCGCGTG AGCCGCGGCG ATCCTGTCGA CGCGCCGTGG
CCCTACGACG GCGCAATTGC GTTCGAGGAG CGGGACGCGG CGGAAGGCGC GCGCGTCTTT
CATATCGTCG ACGGGTGGCG CTATGTGGGG CACGCGCCCT CGCTCGCCGA GGCTGCAACG
CTGCTGGCGA CAAGCGCGCC CGGTGCGTTC GAACTGTCGA CGTGGCGCAT TCTCCAGTCG
CATCTCGCGC GCGGCCTCCG TGTGCTGCCG CTCAGCCGCC CGGTTGTCCA GCCGACCGGC
GCTGTCACGC TCGCAGCAGC CCCTGCCGGC GCCGCCTAA
|
|---|
| Protein sequence | MSEPFLSEPA LDVPIVFVDL ETTGGSVGDH RITEVGVVEV GPNGVSSWTT LVDPGQPIPP
FIQQLTGITN DMVRGAPTFE AIAADLFARL DGKLFIAHNA SFDRGFLRSE FQRAGFAFNP
DVLCTVRLSR ALFPAEKRHG LDALVERHAL MPSDRHRALA DADLLWQFWQ RLHGLVPVDV
LRAQIDKTMR RFRLAGDITE DLIDTAPAGC GVYAFYGESD APLYVGRSVR VRQRLRSHLT
GERRSSKEMK LAQQVRRVEW RATGGEIGAL LAEAQLIAAL RPPNNRVPRV SRGDPVDAPW
PYDGAIAFEE RDAAEGARVF HIVDGWRYVG HAPSLAEAAT LLATSAPGAF ELSTWRILQS
HLARGLRVLP LSRPVVQPTG AVTLAAAPAG AA
|
|---|
| |