Gene Bphy_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0649 
Symbol 
ID6242148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp734276 
End bp735766 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content68% 
IMG OID642592414 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_001856885 
Protein GI186475415 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.814679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCG CCCTGGTCCT CGGTCCCCTG TGCGCGTTCT GCGCACTGAC GCTCAGCGGC 
TGCCTGCTCG GCCCCGACTA CTCGCGCCCG CAGGTGGAGG TGCCCGCGAC GTACCGCTTT
CCCGAGAACT ACGCATCGGA TGTCGCCAAC ACCGAATGGT GGAAGCAGTT CGACGACCCG
GTGCTCAACG ACCTGATCAC CGCGGCGCTG GCGAACAACA ACGATGTGAA GATCGCCGCC
GCACGCGTCG ACCAGTTCCT CGGCCAGTTC GTCACCACGC GCGCGGCGCT GTTCCCGCAG
GTCAGCGCGG GGCTGGATGC GGCGCGCGAG CGCGTCTCGA CCTCGTCGCC GCTGTTCACG
GGCGTGCAGA ACCCGGTGTT CAACTCGTAT CAGCTGGCGC TGTCGGCGTC GTGGGAGATC
GATCTGTTCG GCCACAACCG GCGCCTGACG GAAGCGGCGC GCGCAAGCCT GCTGTCGACG
GAAGAAGCGC GGCGCGGCAC GATCCTCACG CTGGTGTCGT CGGTGGCATC GTCGTACATC
AACCTGCGCA GCCTCGACCG GCAGCTGGAG ATCGCGAAGG CGACCACGGC GAGCCGCGCC
GAATCCGTGC ACGTGTTCGA GCTGCGCTTC CAGGGCGGCG AGGTCTCGCA GATGGAACTC
GCGCAGAGCC AGTCCGAATA CGAGGACTCG CGCGCGCGCA TCCCGCAGAT CGAGTCGCAG
ATCGCGCAGC AGGAAGATGC GCTGTCGGTG CTGCTCGGGC GCAATCCGGG CGATATCCTG
CGCGGCCGCG CGCTGGGCGA ACTGGCGGCA CCCGCGGTGC CCGCCGGACT GCCGTCGAAC
CTGCTCGAAC GCCGGCCCGA TCTGCGTCAG GCCGAGCAGG ATCTGGTCGC GGCCAATGCG
CAGATCGGCG CGGCGAAAGC ACTGTATTTC CCGCAGATCT CGATCACGGG GCTGCTCGGC
ACGCAGAGCG GCCAGTTCTC GAGGCTCTTT ACGGGGCCGG CGCGCGTGTG GTCGTTTGCC
GGCTCCGTGA CGCAGCCGAT CTTCGAGGGC GGCGCGATCG CCGGCCAGGT GAAGCAGGCC
GAGGCCGTGC AGCAGCAGGC GCTGTACACG TACCGCAAGG CGATCCAGGT GGCGTTCCAG
GAGGTCGACG ATGCGCTGAT CTCGTCGCAG AAGCTGCGCG AGCAGTTCGA GGTGCAGGGG
CGGCAGGTGC AGGCGCTCGC GACGTATGCG CATCTGGCGA GGCTGCGGTA CGAAGGCGGC
TATACGAGCT ATATCGAAGT GCTCGATGCC GAACGCAGCC TGTTCAATGC GCAGCTGAGC
GAGACGCAGA CGCAGGCGGG CGTGCTGGTG TCGTACGTGA GCCTGTACAA GGCGATGGGC
GGCGGCTGGG TGGTCACGGC TGAGGGCATG ACTACCCAGC AGGCCGCGCA CGCGGGCGAC
GCGGCACAGC CGGTCAACGG CACGAACGGC ACGGTGGAGG AAGTGAAATG A
 
Protein sequence
MRRALVLGPL CAFCALTLSG CLLGPDYSRP QVEVPATYRF PENYASDVAN TEWWKQFDDP 
VLNDLITAAL ANNNDVKIAA ARVDQFLGQF VTTRAALFPQ VSAGLDAARE RVSTSSPLFT
GVQNPVFNSY QLALSASWEI DLFGHNRRLT EAARASLLST EEARRGTILT LVSSVASSYI
NLRSLDRQLE IAKATTASRA ESVHVFELRF QGGEVSQMEL AQSQSEYEDS RARIPQIESQ
IAQQEDALSV LLGRNPGDIL RGRALGELAA PAVPAGLPSN LLERRPDLRQ AEQDLVAANA
QIGAAKALYF PQISITGLLG TQSGQFSRLF TGPARVWSFA GSVTQPIFEG GAIAGQVKQA
EAVQQQALYT YRKAIQVAFQ EVDDALISSQ KLREQFEVQG RQVQALATYA HLARLRYEGG
YTSYIEVLDA ERSLFNAQLS ETQTQAGVLV SYVSLYKAMG GGWVVTAEGM TTQQAAHAGD
AAQPVNGTNG TVEEVK