Gene Bphy_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0540 
Symbol 
ID6242041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp611889 
End bp612467 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content58% 
IMG OID642592304 
Productsuperoxide dismutase 
Protein accessionYP_001856778 
Protein GI186475308 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.950904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACATA CGCTCCCGCC GCTGCCGTTC GCCAAGAACG CGCTCGCTCC GCACATGTCG 
GAAGAGACGC TCGAGTTTCA CTACGGCAAG CACCACCAGA CCTATGTGAC CAACCTGAAC
AATCTGATCA AGGGCACCGA ATTCGAAAGC CTGTCGCTGG AAGAAATCGT CAAGAAGTCG
TCGGGCGGTG TCTTCAATAA CTCGGCACAG GTGTGGAACC ACACGTTCTT CTGGAACAGC
CTGTCGCCGC AAGGCGGCGG CGCACCGAAG GGCGCGCTCG CGGACGCGAT CAATGCAAAG
TGGGGTTCCT TCGACAAGTT CAAGGAAGAG TTCACGAAGA CGGCAGTCGG CACGTTCGGC
TCCGGCTGGG CATGGCTCGT GAAGAAGGCA GACGGTTCGC TGGACCTGGT GTCGACGAGC
AATGCAGCCA CGCCGCTGAC CACGGATGCA AAGCCGCTGC TGACAATCGA CGTGTGGGAA
CACGCCTACT ACATCGACTA TCGCAACGCA CGTCCGAAGT TTGTCGAAGC GTACTGGAAC
ATCGTCAACT GGGCCTTCGC TGAAAAGAAT TTCGCGTAA
 
Protein sequence
MEHTLPPLPF AKNALAPHMS EETLEFHYGK HHQTYVTNLN NLIKGTEFES LSLEEIVKKS 
SGGVFNNSAQ VWNHTFFWNS LSPQGGGAPK GALADAINAK WGSFDKFKEE FTKTAVGTFG
SGWAWLVKKA DGSLDLVSTS NAATPLTTDA KPLLTIDVWE HAYYIDYRNA RPKFVEAYWN
IVNWAFAEKN FA