| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0475 |
|---|
| Symbol | |
|---|
| ID | 6241976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 538886 |
|---|
| End bp | 539938 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642592239 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001856713 |
|---|
| Protein GI | 186475243 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.625315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0311111 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCG CTGCTGCGAC GTCCGCCTTG AACCCGAGCC AATCGCCGGA ATCCGATGCC
CGTGCGCGAC ATGACGCCGG AAGCCGCGCC GCACCAAAGC AGGCACACGT TGTCGCGGCC
ATCGCCTTCG ACGGCATCAG CCCGTTCCAT CTCTCGGTGC CTTGCGTCGT CTTCGGCGAG
GATCGCAGCG ACGGCGGCGT GCTCGGCTTC GAATTCCGCG TCTGCTCGAT CGAAGCCGGC
CCACTGTCGA CAACCGCGGG TTTCTCGATC GCCGCGCCGC ACGGTCTCGA CGCACTCGCC
GACGCCGACA CGATCATCGT GCCCACCTGG CGCGATCCCG ACGAAGCCCC GCCCGCCGGA
CTACTTGACG CGCTGCGCAC GGCGCACGCA CGCGGCGCGC AACTCGTCGG ACTGTGCCTC
GGCGCCTACG TGCTTGCAGC CGCGGGTCTG CTCGACGGAC GCCCGGCGAC GACGCACTGG
GCGTGGGCCG CCGACTTCGC CAGGCGCTTT CCGAAGGTGA AGGTCGATCC GCAAGTGCTG
TATGTCGATG ACGGCGACAT CCTCACTTCC GCGGGCACGG CGGCGGGCCT CGATTGCTGC
CTGCATGTGG TGCGCAAGCT GTGCGGCGCG CAGAGCGCGA ACTACATCGC TCGGCGGCTG
GTGATACCGC CGCATCGCCA GGGCGGCCAG GCGCAGTACG TGCAGCAGCC CATGCCGCCC
CAGACGCGCG GCAACCGCCT GTCCGCGCTG CTCGACTGGG TGAACGGCAC GCTCGACGCG
CCGCACACGC TCGATTCGCT CGCCGCTCGC GCCGCGATGA GCCGCCGCAC GTTCACGCGG
CATTTCAAGG CGGCGACGGG CACGACCGTA AGCGCATGGC TTCTGACGCA ACGCCTTGCG
CGCGCGCAGC AACTGCTCGA AGGCACGGAC GAGCCGATCG AGTCGATTGC GGGCATGGCG
GGATTCGGTT CGACGGCATC GCTGCGGCAG CATTTCGCTG GCGCGTTCAG GACGTCGCCG
TCCGCGTGGC GGCGGGAGTT TCGCGGCATG TGA
|
|---|
| Protein sequence | MARAAATSAL NPSQSPESDA RARHDAGSRA APKQAHVVAA IAFDGISPFH LSVPCVVFGE
DRSDGGVLGF EFRVCSIEAG PLSTTAGFSI AAPHGLDALA DADTIIVPTW RDPDEAPPAG
LLDALRTAHA RGAQLVGLCL GAYVLAAAGL LDGRPATTHW AWAADFARRF PKVKVDPQVL
YVDDGDILTS AGTAAGLDCC LHVVRKLCGA QSANYIARRL VIPPHRQGGQ AQYVQQPMPP
QTRGNRLSAL LDWVNGTLDA PHTLDSLAAR AAMSRRTFTR HFKAATGTTV SAWLLTQRLA
RAQQLLEGTD EPIESIAGMA GFGSTASLRQ HFAGAFRTSP SAWRREFRGM
|
|---|
| |