Gene Bphy_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0404 
Symbol 
ID6241906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp461460 
End bp462017 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content65% 
IMG OID642592168 
ProductD,D-heptose 1,7-bisphosphate phosphatase 
Protein accessionYP_001856643 
Protein GI186475173 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.412462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.34057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACTG CAAAGAAACT GGTGGTGCTC GACCGGGACG GCGTGATCAA CGTCGACTCG 
GATGCGTTCA TCAAATCACC CGACGAGTGG GTCGCGCTGC CCGGCAGCCT CGAAGCGATC
GCGCGGCTGA ACCAGGCGGG TTATCGCGTG GCTATTGCGA CGAATCAGTC GGGCATCGGC
CGCGGTCTGT TCGACATGGA TGCGCTCAAC GCGATGCATC TGAAGATGCA TCGCGCGGCG
GCCGCCGTCG GCGGGCGCAT CGACGCGGTG TTCTTCTGCC CGCATACGGC CGACGACCAC
TGCGAGTGTC GCAAGCCGAA GCCCGGCATG CTGAAGATGA TCGCCGAGCG CTTCGAGGTC
GACCCGGAAG AGACGCCATG TGTCGGCGAT TCGCTGCGCG ATCTGCAGGC GGGCGCGGCG
CTCGGTTTCA TCCCGCATCT GGTGCTGACG GGCAAGGGCA AGAAGACGCT CGAAGCAGGC
GGTTTGCCCG AGGGCACGCG CGTGCATGAC GATCTGCGCG CGTTCGCCCT GGACTTTCTC
GCCGAAGTAC AAGAATGA
 
Protein sequence
MPTAKKLVVL DRDGVINVDS DAFIKSPDEW VALPGSLEAI ARLNQAGYRV AIATNQSGIG 
RGLFDMDALN AMHLKMHRAA AAVGGRIDAV FFCPHTADDH CECRKPKPGM LKMIAERFEV
DPEETPCVGD SLRDLQAGAA LGFIPHLVLT GKGKKTLEAG GLPEGTRVHD DLRAFALDFL
AEVQE