Gene Bphy_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0397 
Symbol 
ID6241899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp454623 
End bp456014 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content64% 
IMG OID642592161 
ProductSurA domain-containing protein 
Protein accessionYP_001856636 
Protein GI186475166 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.223084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAATCA TGAAAAAGCT TCGCCTGGCA ACGTTCGCGA CCGGCTTCGC TGCGGCCGCT 
TCCATTCTGC TGGCCGGACC CGCGCACGCG CAGGCACTGA ACGGCAGCGG CAGTGCCCAA
ACAGTCGATA CGATCGCGGC TGTCGTCAAT AACGGCGTGA TTACGCAGCG CGAGCTGGAC
ATGCGCGTTG GCCTGATCAC GAAGCGGTTG AATCAGCAGC ACGCGCCGAT TCCGCCCGCC
GACCAGTTGC GCCAGCAGGT GCTCAACCAG ATGGTGCTTG AGCGCATCCA GTTGCAAAAG
GCGCGCGAAG ACGGCATCAC CGTCGACGAC GCGACGGTGC AGCGCACACT CGAACGTCTC
GCCCAGGCGA ACAACTTGCA GCTCGACATG TACCGCGCAC GTATCGAGGC GCAAGGCGTG
CCCTGGACGA CCTTCATGGG CGACGCGAAG ACGGAGCTGA TCCTGTCGCG TCTGCGCGAA
AAGGAAGTGG ACAGCAAGGT CACGGTTTCG GACGCGGAAG TGGCGAACTA CATCGCCAGC
CAGCGCGGCC CGACGGCAGG CCTCGCGAGC GATCTGCACC TCGAGCACAT TTTCCTGAAA
GCGCCGCTCA ATGCGTCCCA GACGGATATC GAAGCAGCCC AGGCCAAGGC GAACGCGCTG
CTTCAGGAAG CCTTGAAGGG CGATAACTTC GGCAAGCTCG CGAAGTCGAA TTCGCAGGCT
CCCGATGCGT CGAAGGGCGG CGATCTGGGC TTTCAGGCAC CGTCCAGGCT ACCGGCTGAA
TTCGTGACGG CGGCTGCGAC GCTGCGTCCG GGCCAGGTCA ACCCGTCCGT GATCCGCACC
AACGACGGCT TCGAGATTGT GCGTCTCGTC GAGCGCCGCT CGGGTCAGGG CTCGGCTTCC
GCCGACTCGA CGAAGCTCGT GCAGACGCAC GTGCGCCACA TCTTGCTGCG TGTCGGTGAC
GGCATGTCGG AGCCGCAAGC ACGCCAGAAG CTGTTGGAAA TCCGCCAGGA AATCGAAGCG
GGCCAAGGCG ACTTCGACAA GTTCGCGCGC ACGTATTCGC AGGACGGCTC GGCGTCGCAG
GGTGGCGATC TGGGCTGGAT CAGCCCGGGC GAAACGGTCC CGGAGTTCGA GCGGGCGATG
AATTCGCTGC AGGACAACCA GATCAGCCAG CCTGTGCGAA GCGAGTACGG CTACCACCTG
ATCCAGGTGC TCGGCCGCCG GGAAGCGGAG GGCTCGGTCT CTCAGCAGAT GGATCTGGCG
CGTCAGGCGA TCGGCCAGCG CAAGGCGGAA CAGGCCTATG CCGACTGGCT GCGTGAACTG
CGTGACACCG CATATGTCGA TTACAAGGTA GGCCCGGTCA CGGGCACATC CGCGGACAAC
ACCGCGCAAT AA
 
Protein sequence
MAIMKKLRLA TFATGFAAAA SILLAGPAHA QALNGSGSAQ TVDTIAAVVN NGVITQRELD 
MRVGLITKRL NQQHAPIPPA DQLRQQVLNQ MVLERIQLQK AREDGITVDD ATVQRTLERL
AQANNLQLDM YRARIEAQGV PWTTFMGDAK TELILSRLRE KEVDSKVTVS DAEVANYIAS
QRGPTAGLAS DLHLEHIFLK APLNASQTDI EAAQAKANAL LQEALKGDNF GKLAKSNSQA
PDASKGGDLG FQAPSRLPAE FVTAAATLRP GQVNPSVIRT NDGFEIVRLV ERRSGQGSAS
ADSTKLVQTH VRHILLRVGD GMSEPQARQK LLEIRQEIEA GQGDFDKFAR TYSQDGSASQ
GGDLGWISPG ETVPEFERAM NSLQDNQISQ PVRSEYGYHL IQVLGRREAE GSVSQQMDLA
RQAIGQRKAE QAYADWLREL RDTAYVDYKV GPVTGTSADN TAQ