Gene Bphy_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0394 
Symbol 
ID6241896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp450074 
End bp450772 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID642592158 
Productnucleotidyl transferase 
Protein accessionYP_001856633 
Protein GI186475163 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.824565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.063826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACAAAG CGATGATCTT CGCCGCCGGA CGCGGCGACC GGATGCGCCC ATTGACGGAC 
ACGTGTCCGA AGCCGCTGTT GAAAGTGGGC GGCAAGGCGC TGATCGAATG GCAGATCGAG
CGGCTCGCGC GAGCGGGCTT CACCAGCATC GTGATCAATC ATGCGTGGCT CGGCGAGCAG
TTGGAAGCCG CGCTTGGCGA TGGCGGGCGG TATGGCGTGT CGTTGCTCTA CTCCGCAGAG
CACGATGCGC TCGAAACGGC GGGCGGCATT GCGCAGGCGT TGACGTTGCT GGAAGACGCC
GGCAAGCCGG AGGTGTTCGT GGCCGTTGCC GGGGACGTCT ATGCGGATTT TGATTATTCC
GCTTTGCGGG GGAAGATCGC GCGCCTCGCC GCAATGGATG AGCCCGGCAT GCATCTGGTG
ATGGTGCCGA ATCCTTCGTT TCATCCTGAT GGGGATTTTG TGCTGGCCGC TGATGGGTGT
TTGGCGCTCG AGGGCGCGCC GCGGCACACA TTCGGAAGCA TCGGCGTATA TGACACGCGG
ATGTTTCGGG ATATCGCGCC GGGTACGCGG CAGGCCTTGA CGCCTTATTA TCGCGAGGCG
ATTGCGATGG GGCGCGCTAC CGGTGAACTC TATGAGGGGT TATGGGAGAA CGTCGGGACG
CCAGCGCAGC TTCATGCGCT CGATGAGATT TTGAAGTAG
 
Protein sequence
MNKAMIFAAG RGDRMRPLTD TCPKPLLKVG GKALIEWQIE RLARAGFTSI VINHAWLGEQ 
LEAALGDGGR YGVSLLYSAE HDALETAGGI AQALTLLEDA GKPEVFVAVA GDVYADFDYS
ALRGKIARLA AMDEPGMHLV MVPNPSFHPD GDFVLAADGC LALEGAPRHT FGSIGVYDTR
MFRDIAPGTR QALTPYYREA IAMGRATGEL YEGLWENVGT PAQLHALDEI LK