Gene Bphy_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0393 
Symbol 
ID6241895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp448102 
End bp449997 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content62% 
IMG OID642592157 
ProductABC transporter related 
Protein accessionYP_001856632 
Protein GI186475162 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.17883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCT ATTCCGCTTC GTCCGAACCG TCGCCGATCT CGAATTTGCC GCGCAACGAC 
TGGCAAACCA TCGTCTCGCT GCTGCCTTAT CTCTCGACGT ACAAGTGGCG CGTCGTGTTT
GCGCTCAGCT GCCTGATCGG CGCGAAGGTT GCCAATCTCG GCGTGCCGAT CGTGATGAAG
CACATTGTCG ACAGTCTCGC TTCCGTGCAG CATCTGACGG CGCTCGGACG CGCGACGAAT
GCGCCCGGTA TCGTGCTGCT CGGCGGCGTG GGGCTGCTGG TAATCGCGTA TGCCGTCGTG
CGCCTGTCGA CGTCGCTCTT TACGGAGTTG CGCGAAATTC TCTTCTCGAA GGTGACGGAA
AGCGCGGTGC GTCAGCTTGC GCTGAAGGTA TTCCGGCATC TGCATTCGCT GTCGCTGCGC
TTTCATCTTG AACGGCAGAC GGGCGGCATG TCGCGCGACA TCGAGCGCGG CACGCGCGGC
ATCACGCAGC TGATCTCGTA TTCGCTGTAC AGCATTCTGC CGACGCTCGT CGAATTCGGA
CTCGTGCTGG GTTTTTTTAT CGTCAAATAT GAGGCGTACT ACGCGATCGT CACGGCGATC
GCGCTGGTGG CGTACATCAC CTACACGGTG AAGGTGACCG AGTGGCGCAC GCATTTTCGC
CGCACGATGA ACGAACTCGA TTCGAAGGCG AACTCGCGCG CGATCGATTC GCTGCTGAAC
TACGAGACGG TCAAATACTT CAATAACGAA GAGTGGGAAG CGCAGCGCTA CGACGAAAAC
CTGAAGCGTT ACCGGGCGGC CGCGATCAAG TCGCAGAACT CGCTGTCGGC GCTGAATTTC
GGGCAGCAGG CGATCATCGG CACGGGGCTC GTGTTCATCC TGTGGCGTGC GACGCAAGGC
GTGATGGCGG GTCGCCTCAC GCTCGGCGAT CTGGTGCTGA TCAACACGTT CATGCTGCAG
TTGTATATTC CGCTGAATTT TCTCGGCGTC GTGTATCGCG AACTGAAGCA GAGTCTCACC
GATATGGACC GCATGTTCAC GCTGCTGGGC GCCGCGCGCG AAGTGCCCGA CGCACCCGAT
GCGGCGCCGC TCGCCGTGCA GGGTGCGCAG GTCAGTTTCG ATCATGTGAG CTTCGCGTAC
GAGCCGTCGC GCCCGATCCT GCACGACGTG AGCTTCACGA TTGCCGCGGG CACGACGACG
GCCGTCGTCG GTCATAGCGG CTCGGGCAAG TCGACCCTCG CGCGGCTGCT GTTTCGCTTC
TACGACCTGG ACCGTGCGAC GGGTGGCGCG ATTCGCATCG ACGGGCAGGA CATTCGCGAT
GTCACCCAGG ATTCGCTGCG CGCGTCGATC GGCATCGTGC CGCAGGACAC CGTGCTATTC
AACGACACGA TCTACTACAA CATCGCGTAT GGGCGCCCTT CGGCGACGCG CGACCAGGTG
ATCGCGGCGG CGCGTGCGGC GCATATTCAC GAGTTCATCG AGAGCTTGCC GAAGGGCTAT
GACACGCCTG TCGGCGAGCG TGGATTGAAG TTGTCGGGTG GCGAGAAGCA GCGCGTCGCG
ATTGCGCGGA CCTTGCTGAA GAATCCGCCT GTGCTGCTGT TCGACGAAGC GACGTCGGCG
CTCGACTCGC GCTCCGAGCG GGCGATCCAG CATGAGCTCG ATCAGATTGC GCGCGATCGG
ACGACGTTGA TTATTGCGCA TCGTCTTTCG ACCGTTGTGC ATGCGGAGCA GATCATCGTG
ATGGATAAGG GGCGCATCGT CGAGCGCGGA AATTTTGCTG CTCTCGTGCA GGCGGGAGGC
CTATTTGCGC AGATGTGGGC GCTGCAGCAG GAGCGTGCTG CAGCGGCGCA TGCGGAGGAT
GCTGGTGTTG AGGCGCGGGG CGAGGGTGTT GGTTAG
 
Protein sequence
MRRYSASSEP SPISNLPRND WQTIVSLLPY LSTYKWRVVF ALSCLIGAKV ANLGVPIVMK 
HIVDSLASVQ HLTALGRATN APGIVLLGGV GLLVIAYAVV RLSTSLFTEL REILFSKVTE
SAVRQLALKV FRHLHSLSLR FHLERQTGGM SRDIERGTRG ITQLISYSLY SILPTLVEFG
LVLGFFIVKY EAYYAIVTAI ALVAYITYTV KVTEWRTHFR RTMNELDSKA NSRAIDSLLN
YETVKYFNNE EWEAQRYDEN LKRYRAAAIK SQNSLSALNF GQQAIIGTGL VFILWRATQG
VMAGRLTLGD LVLINTFMLQ LYIPLNFLGV VYRELKQSLT DMDRMFTLLG AAREVPDAPD
AAPLAVQGAQ VSFDHVSFAY EPSRPILHDV SFTIAAGTTT AVVGHSGSGK STLARLLFRF
YDLDRATGGA IRIDGQDIRD VTQDSLRASI GIVPQDTVLF NDTIYYNIAY GRPSATRDQV
IAAARAAHIH EFIESLPKGY DTPVGERGLK LSGGEKQRVA IARTLLKNPP VLLFDEATSA
LDSRSERAIQ HELDQIARDR TTLIIAHRLS TVVHAEQIIV MDKGRIVERG NFAALVQAGG
LFAQMWALQQ ERAAAAHAED AGVEARGEGV G