| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0339 |
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| Symbol | |
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| ID | 6241841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 380830 |
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| End bp | 383928 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642592103 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001856578 |
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| Protein GI | 186475108 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.32789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAA TCCGTATCCG TGGGGCTCGG ACCCACAACC TGAAGAACGT CAATCTCGAC
TTGCCGCGCC ACAAGCTGGT CGTGATTACC GGCCTGTCCG GCTCGGGCAA ATCGTCGCTC
GCCTTCGACA CGCTCTACGC GGAAGGCCAG CGCCGCTATG TGGAGAGCCT GTCTGCATAC
GCCCGGCAGT TTCTGCAACT GATGGAAAAG CCGGACGTCG ACCTGATCGA AGGCCTGTCG
CCCGCCATTT CGATCGAGCA GAAAGCGACC TCGCACAACC CGCGCTCGAC GGTCGGCACG
GTCACCGAAA TCCACGACTA TCTGCGACTG CTTTACGCAC GTGTCGGTAC GCCTTACTGC
CCGGACCACG AAATTCCGCT GGAGGCGCAA AGCGTCTCGC AGATGGTGGA CGCCGCGCTG
GCGCTGCCCG ACGACACGAA GCTGATGATC CTCGCGCCCG TCGTCGCCAA TCGCAAAGGC
GAGCACACCG AGCTGTTCGA GGACATGCAG GCGCAAGGCT TCGTCCGTTT CCGCGTGCGG
TCGGGCGGCG GCACGGCGAA CGAAGGCGTG GCAAAGATCT ACGAGGTCGA CTCGCTGCCG
CAGCTCAAAA AGAACGACAA GCACACGATC GACGTGGTCG TCGACCGGCT CAAAGTGCGC
GCGGACGCGA AGCAGCGCCT CGCCGAATCG TTCGAAACCG CGCTGCGTCT GGCCGATGGC
CGCGCGATCG CGCTCGAGAT GGACACCGAC AAAGAGCATC TGTTCAGCTC GAAGTTCGCG
TGCCCGATCT GCTCATACTC GCTGCAGGAA CTGGAACCGC GTCTTTTCTC GTTCAACAAC
CCAATGGGCG CGTGCCCGGA ATGCGACGGA CTCGGCCAGA TCACGTTCTT CGATCCGAAG
CGGGTGGTCG CGCATCCATC GCTTTCGCTG GCGGCGGGCG CCGTGAAGGG CTGGGACCGG
CGCAACCAGT TCTACTTCCA GATGCTGCAA AGCCTCGCAG CGTTCTACGA ATTCGACATC
GACACCGCGT TCGAAGATCT TCCTGAGAAG GTGCGCAACA TCCTGCTGTA CGGCTCTGGC
AAGCAGACGG TGCCGTTCTC GTACATCAAC GAGCGTGGCC GCACTTCCGT GCGCGAGCAC
GGGTTCGAAG GGATCATTCC GAATCTGGAG CGCCGCTATC GCGAGACCGA TTCGGTCGCG
GTGCGCGAAG AACTGGCGAA GTATCAGAAC AATCAGGCCT GTCCGTCGTG CGAAGGCACG
CGCCTGCGCC GCGAAGCGCG CTTCGTGCGC ATCGGCGCGG ACAAGGACGC GCGCGGCATC
TACGAAGTGA GCGGCTGGCC GCTGCGCGAC ACGCTCGGCT ACTTCCAGAC GCTGCGCCTC
GAAGGCGCAA AGCGCGAAAT CGCCGACAAG GTGATCAAGG AAATCGTCGC GCGACTGATG
TTCCTGAATA ACGTCGGGCT CGATTACCTG TCGCTGGAGC GCAGCGCTGA AACGCTTTCG
GGCGGCGAGG CGCAGCGCAT CCGGCTCGCA TCGCAGATCG GCTCGGGGCT GACGGGCGTG
ATGTACGTGC TCGACGAACC TTCCATCGGT TTGCATCAGC GCGACAACGA CCGCCTCATC
TCGACGCTCA AGCATCTTCG CGATCTCGGC AATTCGGTGA TCGTCGTCGA GCACGACGAG
GACATGATCC GCATGGCCGA CTACGTCGTC GACATGGGAC CGGGCGCAGG CGAACACGGC
GGCATGGTGA TCGCCGAAGG CACACCCGTC GAAGTGCAGG CGGACCCGGC GTCGATGACG
GGCCAGTATC TGGCGGGCGC GCGCCGCATC GAATTTCCCG ACGACCGCAA ACAGGCCGAC
GAGCGCCATC TTCGCATCAT CGAGGCATAC GGCAACAACC TGAAGCGCGT CACGCTCGAT
CTGCCCGTCG GCCTGCTGAC CTGCGTGACG GGCGTATCCG GTTCGGGCAA ATCGACGCTG
ATCAACGACA CGCTCTATCA CGCCGTCGCG CAGCATCTGT ACGGCTCGTC GACGGAGCCA
TCGCCGTTTG AGGCAATCGA AGGCCTCGAA CACTTCGACA AGGTGATCAA CGTCGACCAG
TCGCCGATCG GCCGCACGCC GCGCTCGAAT CCCGCCACCT ACACGGGCGT CTTCACGCCA
ATCCGCGAAC TGTTCGCAGG CGTGCCCGCC GCGAAGGAGC GCGGCTACGA TCCGGGCCGT
TTCTCGTTCA ACGTGAAGGG CGGGCGCTGC GAAGCATGTC AGGGCGACGG TGTGCTGAAA
GTCGAAATGC ACTTTCTGCC GGACGTGTAC GTGCCGTGCG ATGTGTGTCA CGGCAAACGG
TACAACCGCG AAACGCTCGA TATTCTCTAC AAAGGCCAGA ACATCAGCGA AGTGCTGGAG
ATGACGGTCG AGCACGCGTA TGACTTTTTC AAGGCGGTGC CTGTCGTCGC GCGCAAGCTG
AAGACGTTGC TCGACGTGGG TCTCGGCTAT ATCCGGCTCG GCCAGTCGGC AACCACGCTG
TCGGGGGGCG AGGCGCAGCG TGTGAAGCTG TCGCTGGAAC TGAGCAAGCG CGATACGGGT
CGCACGCTTT ATATTCTCGA CGAGCCGACC ACGGGCCTGC ACTTCCACGA TATCGCGCTG
CTGCTCGAAG TGATTCACCG GTTGCGCGAT CAAGGAAATA CGGTGGTCAT CATCGAGCAT
AATCTCGATG TGATAAAAAC TGCCGACTGG GTCATCGATC TCGGCCCGGA AGGGGGCGCC
GGCGGCGGCC AGATCATCGC GCAAGGCACG CCGGAGCAGG TGTCGAAGTC GAAGGCAAGT
TTTACCGGCC GCTATCTGGC GCCGCTTTTG CAACGCGACA GGGCAGCCGT CCGGGCGAGT
CACGAAGACG AACCGGACGA GGAAGAAGCT GAAGCAACCA TCGGCGATGC CGAAACTGCA
GAATCCGCCA ATCCAGCCGT AAAAGCGGTA AGGCCGAAAA AGGCCGTCGC CGCCGATGCA
CCGAAACCGG CTTCGAAATC GACAGCGAAG TCAACGGCAG GCACGGCCAA AGCCGCGGCG
AAACCCGCGA AAGCCGGCAA GCCGAGCGTC AAAACCTGA
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| Protein sequence | MEQIRIRGAR THNLKNVNLD LPRHKLVVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLQLMEK PDVDLIEGLS PAISIEQKAT SHNPRSTVGT VTEIHDYLRL LYARVGTPYC
PDHEIPLEAQ SVSQMVDAAL ALPDDTKLMI LAPVVANRKG EHTELFEDMQ AQGFVRFRVR
SGGGTANEGV AKIYEVDSLP QLKKNDKHTI DVVVDRLKVR ADAKQRLAES FETALRLADG
RAIALEMDTD KEHLFSSKFA CPICSYSLQE LEPRLFSFNN PMGACPECDG LGQITFFDPK
RVVAHPSLSL AAGAVKGWDR RNQFYFQMLQ SLAAFYEFDI DTAFEDLPEK VRNILLYGSG
KQTVPFSYIN ERGRTSVREH GFEGIIPNLE RRYRETDSVA VREELAKYQN NQACPSCEGT
RLRREARFVR IGADKDARGI YEVSGWPLRD TLGYFQTLRL EGAKREIADK VIKEIVARLM
FLNNVGLDYL SLERSAETLS GGEAQRIRLA SQIGSGLTGV MYVLDEPSIG LHQRDNDRLI
STLKHLRDLG NSVIVVEHDE DMIRMADYVV DMGPGAGEHG GMVIAEGTPV EVQADPASMT
GQYLAGARRI EFPDDRKQAD ERHLRIIEAY GNNLKRVTLD LPVGLLTCVT GVSGSGKSTL
INDTLYHAVA QHLYGSSTEP SPFEAIEGLE HFDKVINVDQ SPIGRTPRSN PATYTGVFTP
IRELFAGVPA AKERGYDPGR FSFNVKGGRC EACQGDGVLK VEMHFLPDVY VPCDVCHGKR
YNRETLDILY KGQNISEVLE MTVEHAYDFF KAVPVVARKL KTLLDVGLGY IRLGQSATTL
SGGEAQRVKL SLELSKRDTG RTLYILDEPT TGLHFHDIAL LLEVIHRLRD QGNTVVIIEH
NLDVIKTADW VIDLGPEGGA GGGQIIAQGT PEQVSKSKAS FTGRYLAPLL QRDRAAVRAS
HEDEPDEEEA EATIGDAETA ESANPAVKAV RPKKAVAADA PKPASKSTAK STAGTAKAAA
KPAKAGKPSV KT
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