Gene Bphy_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0332 
Symbol 
ID6241834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp372982 
End bp374985 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content65% 
IMG OID642592096 
Productsodium/hydrogen exchanger 
Protein accessionYP_001856571 
Protein GI186475101 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGC CGCTCGAAAT GACGCTGTTT CTGCTGCTGG CCTCAGTGGT GGGCGTCGTC 
GTGTTCCGCT ACCTGAACCT GCCGCCGATG CTCGGCTATC TGTCCGTGGG GATCGTGGTC
GGACCGCACG CGTTCGGCAT CGTGCCCGAC TCGGTCGGCG CGCAGAACCT CGCGGAATTC
GGCGTGGTGT TCCTGATGTT CTCGATCGGG CTGGAGTTTT CGCTCGCGAA GCTGCGCTCG
ATGCGCCGGC TCGTGTTCGG ACTGGGCTTG CTGCAGGTGC TCGGCACGAT CGCCATCGCG
GTGTCGCTCG GTTTCGTGTT CGAGCGCTGG GTGCACATCT CATGGCAGGC AAGCGTCGCA
CTGGGCGGCG CGCTGGCGAT GTCGTCGACG GCCATCGTCA GCAAGATGCT CGCGGAGCGG
CTCGAAATCG AAACCGAACA CGGCCGCAAT ATCTTCGGCG TGCTGCTGTT CCAGGATCTG
GCCGTGGTGC CGCTGCTGAT CGTCATTGCG GCGCTCGGCG GGAGTTCGGA CGATCTCGTC
AGATCGCTCG GGATCGCGTC GATCAAGATC GTGATCGCAT TGGCGCTGCT GCTGATCGTC
GGGCAGAAGT TCATGACGCG CTGGTTCAAC GTCGTCGCGC GGCGCCGTTC GCAGGAGCTG
TTCGTCCTGA ACCTGCTGCT TGTCACGCTG GGCGCCGCGT TCATCACGGA TAAATTCGGC
CTGTCGCTCG CGCTGGGCGC GTTCATCGCG GGCATGCTGA TCGCCGAAAC GCCGTACCGG
CATCAGGTCG AAGAGGACAT CAAGCCGTTC CGTGACGTGC TGCTCGGGCT CTTCTTCGTG
ACGACGGGCA TGCTGCTCAA TCCGCGCGTG ATCTGGGAGC ATCCGCTGAT CGTGCTCGCG
TTCCTGATCG GCCCCGTGCT CCTTAAAGCG GTGATGATCA CGGGTCTCGC ACGTCTGTTC
GGTGCCACGC CGGGTGTCGC GATGCGTACG GGTATCGGGC TTGCGCAGGC GGGCGAGTTC
GGCTTTGTGC TGCTCAACCT GATTCTCGAT AAGCACCTGG TCGACGCAAC GCTCTTGCAG
GCCATTCTCG CCGCGATGCT GCTGTCGATG CTTGCCGCGC CGTTCATGAT CCAGAACGCG
GACCGCATCG TGCTGCGGCT GTCGTCGACT GAATGGATGA TGCAGTCGTT GCAGATGACG
CGCATCGCGA CGCAAAGCCT CAAACAGAGC GGCCACGTGA TCATCTGCGG CTATGGCCGC
GCCGGGCAGA ATCTCGCACG CATGCTGGAG CACGAGGGGC TGTCGTATGT CGCGCTCGAC
CTCGATCCCG ACCGTGTGGC GGCCGCGGCG GCGGCGGGCG AGTCGGTCGT GTTCGGCGAT
GCCGGGCGGC GCGAGTCGCT GCTCGCAGCC GGTATCCACC GGGCGGCGAC CGTGGCGATC
ACGTATGCGA ACACGCCGTC GGCGCTGCGC GTGCTGCATA ACATTCACGA GCTCGAGCCG
ACGCTGCCTG TGATCGTGCG CACTGTCGAC GATAGCGACC TCGAAAAGCT CCTCGCCGCG
GGCGCGACGG AAGTGATTCC GGAGATCGTC GAGGGCAGCC TGATGCTCGC CTCGCACACG
CTCGTCGTGA TGGGCGTGCC CATGCGCCGG GTCGTGCGGC GAGTGGAGGA ACTGCGCGAC
GAGCGCTATA GTCTGCTGCG CGGCTACTTC CACGGCGCCG ACGACGTGGA TGACGACGAC
GGTCACGAGC AGGTGCGGCT ACAATCCGTG CCCGTCGACG AAAAGGCCGA TGCCGTCGGG
CGAACGCTCG AGGAACTCGG GCTGTTCGAT CTCGGCGTCG AGGTGACGGC GATTCGCCGG
CATGGCATTC GCGGCGTGGA GCCCGATCCA TCGACCAAGC TGCGCGCGAG CGACATCGTC
GTGCTGCGGG GTCTGCCCGA AGCGCTGGCG GAAGCGGAAG AGCGTCTGTC GAAGCATCGG
CGCGCGGGGG CGGCGGCGGC CTGA
 
Protein sequence
MISPLEMTLF LLLASVVGVV VFRYLNLPPM LGYLSVGIVV GPHAFGIVPD SVGAQNLAEF 
GVVFLMFSIG LEFSLAKLRS MRRLVFGLGL LQVLGTIAIA VSLGFVFERW VHISWQASVA
LGGALAMSST AIVSKMLAER LEIETEHGRN IFGVLLFQDL AVVPLLIVIA ALGGSSDDLV
RSLGIASIKI VIALALLLIV GQKFMTRWFN VVARRRSQEL FVLNLLLVTL GAAFITDKFG
LSLALGAFIA GMLIAETPYR HQVEEDIKPF RDVLLGLFFV TTGMLLNPRV IWEHPLIVLA
FLIGPVLLKA VMITGLARLF GATPGVAMRT GIGLAQAGEF GFVLLNLILD KHLVDATLLQ
AILAAMLLSM LAAPFMIQNA DRIVLRLSST EWMMQSLQMT RIATQSLKQS GHVIICGYGR
AGQNLARMLE HEGLSYVALD LDPDRVAAAA AAGESVVFGD AGRRESLLAA GIHRAATVAI
TYANTPSALR VLHNIHELEP TLPVIVRTVD DSDLEKLLAA GATEVIPEIV EGSLMLASHT
LVVMGVPMRR VVRRVEELRD ERYSLLRGYF HGADDVDDDD GHEQVRLQSV PVDEKADAVG
RTLEELGLFD LGVEVTAIRR HGIRGVEPDP STKLRASDIV VLRGLPEALA EAEERLSKHR
RAGAAAA