| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0326 |
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| Symbol | |
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| ID | 6241828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 367463 |
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| End bp | 368980 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642592090 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_001856565 |
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| Protein GI | 186475095 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.35647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCA GCCTCCAACT CCGCCTGTCG CAGCATCTTG CGCTGACACC ACAACTGCAA
CAGTCCATCC GGCTGCTGCA GCTGTCTACG CTCGAACTGC AACAGGAAGT CTCGATGGCG
ATCGCCCAGA ATCCGCTGCT CGAAGCGGAG GACGATTGGA TCGCGAGCCC GTTGCGCGTC
GCCGCTGACG GCACCGTGAT CGCGCAAACA GCGCAGAATG CCGCGCCGGA GGAAATGTCC
GGCGCGCCGC CGTCTTCGGC GTCCACGTCT TCGAGCGAAA GCTCGGATAA CGCCGAGCCG
CAGGGCGTCG ACGAGTACAA CGGGCTGGGT TCGGACGCGA ATGGCGATTC GAGCCAGTGG
AATCTCGACG ACTACGGCCG TTCGGGCAAC GCATCGGACG ACGACGATCT GCCGCCGCTG
CAAATCCACG AATCGACCAC CACGCTGCGC GATCACCTGA CTGCTCAACT TCGCGTGACG
CAGGCCAGCC CGCGCGACCG CGCGCTCGTC ACGTTCCTGA TCGAATCGCT CGACGACGAC
GGCTATCTGA CGGCCACGTT CGACGAAATA CTGGCCGACC TGCCCGAAGA GCTCGAAGTC
GATACCGACG AACTGAACGC AGCACTCGCA TTGCTGCATA GCTTCGATCC CGCGGGCGTC
GGCGCGCGCT CGGCGTCCGA ATGCCTGCGG CTGCAGCTGT GCCGGCTCGA TCCGTCGCCC
ACGCGCACGC TCGCACTCGA CATCGTCGCA CATCACCTCG AACTGCTCGC CGCACGCGAC
TTCACGCGTC TGCGCAAGTA CCTGAAGGCC AGCGACGACG ATCTGCGCGA CGCCCACGCA
TTGATCCGCT CGCTCGAACC TTTCCCGGGC GCAGCATACG GCAAGGCCGA AGCCGACTAC
GTCGTGCCCG ACATCATGGT GCGCAGAACG GCACAGGGGT GGCAGGCAGA ACTGAATCCG
GAAGTCGTAC CGAAGCTGCG TATCAACCAT CTGTACGCGA ATATCCTGCG CAACAATCGC
GGCGATCCGG GCAGCGGTTC GCTGCGGCAG CAACTGCAGG AAGCACGCTG GTTGATCAAG
AACATCCAGC AACGCTTCGA AACGATTCTG CGCGTGGCAC AGGCTATTGT GGAGCGTCAA
AAGAACTTTT TCGCCCACGG CGAAATTGCC ATGCGCCCCT TGGTTTTGCG GGAAATAGCT
GATACGCTGG GTTTACACGA GTCGACGGTC TCGCGTGTGA CAACCGGCAA GTACATGCTC
ACCCCATTCG GGACGCTTGA ATTTAAGTAC TTCTTCGGAT CGCACGTGTC TACCGACACG
GGGGGCGCGG CCTCTTCCAC GGCCATTCGC GCACTCATCA AGCAACTGAT AGGAGCAGAA
GACACCAAAT CTCCTCTTTC AGACAGCCGC ATTGCCGAAC TGCTGGCGGA ACAGGGTTTC
GTCGTCGCGC GCCGTACTGT TGCGAAATAC CGCGAAGCAC TGAAGATCCC GGCAGTCAAT
CTGCGCAAGT CTCTGTAG
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| Protein sequence | MKASLQLRLS QHLALTPQLQ QSIRLLQLST LELQQEVSMA IAQNPLLEAE DDWIASPLRV
AADGTVIAQT AQNAAPEEMS GAPPSSASTS SSESSDNAEP QGVDEYNGLG SDANGDSSQW
NLDDYGRSGN ASDDDDLPPL QIHESTTTLR DHLTAQLRVT QASPRDRALV TFLIESLDDD
GYLTATFDEI LADLPEELEV DTDELNAALA LLHSFDPAGV GARSASECLR LQLCRLDPSP
TRTLALDIVA HHLELLAARD FTRLRKYLKA SDDDLRDAHA LIRSLEPFPG AAYGKAEADY
VVPDIMVRRT AQGWQAELNP EVVPKLRINH LYANILRNNR GDPGSGSLRQ QLQEARWLIK
NIQQRFETIL RVAQAIVERQ KNFFAHGEIA MRPLVLREIA DTLGLHESTV SRVTTGKYML
TPFGTLEFKY FFGSHVSTDT GGAASSTAIR ALIKQLIGAE DTKSPLSDSR IAELLAEQGF
VVARRTVAKY REALKIPAVN LRKSL
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