| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0316 |
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| Symbol | ipk |
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| ID | 6244625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 357869 |
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| End bp | 358750 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642592080 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001856555 |
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| Protein GI | 186475085 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00626932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAA CGAACGACTC GCTGCGCGAC TGTCTCGCTC CAGCGAAGCT GAACCTCTTC
CTGCACATCA CCGGCCGTCT GCCGAACGGG TATCACGCGT TGCAGACAGT GTTCCAGTTG
CTCGACTGGG GCGACACGCT GCACTTCACG CGTCGGGATG ACGGCGCGAT CACGCGCGGC
ACCGATATCG TCGATGTTCC CGCCGACGCC GACCTCACCG TGCGCGCCGC GAAGCTGCTC
AAGGAACACA CGGGGACGCG CGAAGGCGTG AACATCGAAA TCGACAAGCG CCTGCCGATG
GGTGCGGGTC TCGGCGGCGG CAGCTCCGAT GCGGCGACAA CGCTGCTCGC GCTGAACCGT
CTATGGAAGC TGAATCTGCC GCGCGCCGAA TTGCAGGTGC TCTCGGTGAA ACTGGGCGCA
GATGTGCCGT TCTTCGTGTT CGGAAAAAAT GCCTTCGCGG AGGGTATCGG AGAGGAACTG
GAGCAGGTAC AATTGCCGCC GCGCCACTTC CTGGTGGTGA CACCGAGGGT TCATGTTCCA
ACGTCAGCGA TTTTTTCTGA AAAAGAGTTG ACAAGAGATA CGAAGCCCCT CACAATAGCA
GACTTTCTTG CACAGCATAG TTGCAGCGCA GAATGGCCAG ACAGCTTCGG CCGGAATGAC
ATGCAGCAGG TTGTCGCAGG GAAATACGCG GAAGTTGCGC AGGTGCTTAG ATGGTTTGAC
AACATCGCGC CGGCGCGGAT GACAGGATCA GGTGCAAGTG TTTTTGCAGC GTTCCGTAGC
AAAGATGAAG CAGTCGCGGC GCATGCCAAA CTGCCAGTCG GATGGAGCGG TGCAGTAACA
GCAAGTCTCG ATACGCATCC ACTCTTTGCT TTCGCGGCAT AA
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| Protein sequence | MIETNDSLRD CLAPAKLNLF LHITGRLPNG YHALQTVFQL LDWGDTLHFT RRDDGAITRG
TDIVDVPADA DLTVRAAKLL KEHTGTREGV NIEIDKRLPM GAGLGGGSSD AATTLLALNR
LWKLNLPRAE LQVLSVKLGA DVPFFVFGKN AFAEGIGEEL EQVQLPPRHF LVVTPRVHVP
TSAIFSEKEL TRDTKPLTIA DFLAQHSCSA EWPDSFGRND MQQVVAGKYA EVAQVLRWFD
NIAPARMTGS GASVFAAFRS KDEAVAAHAK LPVGWSGAVT ASLDTHPLFA FAA
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