| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0269 |
|---|
| Symbol | |
|---|
| ID | 6241771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 312296 |
|---|
| End bp | 312766 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642592032 |
|---|
| Product | preprotein translocase subunit SecB |
|---|
| Protein accession | YP_001856508 |
|---|
| Protein GI | 186475038 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1952] Preprotein translocase subunit SecB |
|---|
| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACG AGAACAACCA GCCGTTCTTC AACATCCAGC GCATCTACCT GAAGGACATG
TCGCTCGAGC AGCCGAATTC GCCCGCTATT TTCCTCGAGC AGGAAATGCC GTCGGTCGAA
GTGGAAGTGG ACGTGAAGGC CGAGCGCCTC GCGGACACGG TGTTCGAAAT CCTCGTCACG
GGCACCGTGA CGGCCAAGGT CAGCGACAAG GTGGCGTTCC TGATCGAAGC CAAGCAGGCC
GGCATTTTCG ACATCCGCAA CATCCCGGCT GAGCAGATCG ATCCCCTCGT CGGCATTGCA
TGCCCGACCA TTCTGTTCCC GTACCTGCGC TCGAACATCG CTGATGCGAT CACGCGAGCA
GGCTTCCCGC CCATCCACCT CGCGGAGATC AACTTCCAGG CGCTGTACGA GCAACGTCTC
GCGCAGATCG CGACGCAGGA AACGGGCGCG GGCAGCGCAG CCCACCACTG A
|
|---|
| Protein sequence | MSDENNQPFF NIQRIYLKDM SLEQPNSPAI FLEQEMPSVE VEVDVKAERL ADTVFEILVT
GTVTAKVSDK VAFLIEAKQA GIFDIRNIPA EQIDPLVGIA CPTILFPYLR SNIADAITRA
GFPPIHLAEI NFQALYEQRL AQIATQETGA GSAAHH
|
|---|
| |