Gene Bphy_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0212 
Symbol 
ID6241714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp234977 
End bp236206 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content62% 
IMG OID642591974 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_001856451 
Protein GI186474981 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTT CGAACTCCGG CTCCATCAGC CTTTCCAGCT TCGCTTCTTT CGTTCCGCGA 
TCCGCCGCCA GCAAGTTTGC GTTGGGTTTC GCGCTGCCGG CAGCACTCGT CGCGAGCACC
GCGTTCGCGC AGGTGCCGCC GCCGGGCGTG AACGCACGCT CGTGGGTGCT CGTCGATGCA
ACCAGCAACC AGGTGCTCGC ATCGGGCAAT CCGGACGAGC GCGTGGAACC GGCTTCGCTG
ACCAAGCTGA TGACGGCGTA TCTGACGTTC GAAGCGCTCG CGTCGAAGAA GATCACGATG
GACCAGTCCA TCAATCCCAG CGAGGCCGTG CGCCGCGTGA GGAACGACGA GTCGCGCATG
TTCATCGAGG CGAACAAGCC CGTCACCGTG CACGACCTCG TGTACGGCAT GATCATCCAG
TCGGGCAACG ACGCCGCCAT CGCGCTCGCC GAACTGGTCG GCGGCAGCGA AGCGCAGTTC
GTCAACATGA TGAACGCGGA AGCGCAAAAG CTCGGCATGA AGAACACGCA TTTCGCCGAC
GTGAACGGCA TGCCCGATCC GCAGCACTAC ACGACGGCAG GCGACCTCGC CATTCTGTCG
GCGCGCCTGA TTCGCGACTA TCCGGACTAC TACAACATCT TTTCCGTGAA GGAATTCACG
TATAACAAGA TCAAGCAGCC GAACCGCAAC CGTCTGCTGT GGATCGACCC GACCGTCGAC
GGCCTGAAGA CGGGCCACAC GCAAGCGGCC GGATACTGTC TGATCGCGAG CGCGAAGCGT
TCGTTGCCCG GCGTGCCGGA TGCGTCGCGC CGTCTGGTGA CAGTGATGAT GGGCGAGCAG
AAGGAACACG ACCGCGTGCA AGACAGCCTG AAGATGCTGA ACTACGGCTA CTCTGCGTAC
GACGCGGTGC GCCTGTACAA GGCCAATCAG GTCGTCGAGA CGCCGCGCGT CTACAAGGGC
TCGCAGGACA CCGTGAAGCT CGGCGTGACC ACCGATCAAT ACATCACGCT GCCGAAGGGC
ATGGCCGACA AGGCCAAGCC GCAGATCGAA CACGCCGATC CGTTGATCGC ACCGATTGCG
CAGGGCCAGC AGGTCGGCAC GGTGAAGTTT GTCGCCGATG GCAAGACGCT CGCGCAGGTG
CCGCTGGTCG CGCTGCAGGG TGTGCCGCAG GCGGGCATCG TCGGCCGCGT GTGGGATTCG
ATGATGCTGA TGTTCAACAA GAAGAAGTAA
 
Protein sequence
MRFSNSGSIS LSSFASFVPR SAASKFALGF ALPAALVAST AFAQVPPPGV NARSWVLVDA 
TSNQVLASGN PDERVEPASL TKLMTAYLTF EALASKKITM DQSINPSEAV RRVRNDESRM
FIEANKPVTV HDLVYGMIIQ SGNDAAIALA ELVGGSEAQF VNMMNAEAQK LGMKNTHFAD
VNGMPDPQHY TTAGDLAILS ARLIRDYPDY YNIFSVKEFT YNKIKQPNRN RLLWIDPTVD
GLKTGHTQAA GYCLIASAKR SLPGVPDASR RLVTVMMGEQ KEHDRVQDSL KMLNYGYSAY
DAVRLYKANQ VVETPRVYKG SQDTVKLGVT TDQYITLPKG MADKAKPQIE HADPLIAPIA
QGQQVGTVKF VADGKTLAQV PLVALQGVPQ AGIVGRVWDS MMLMFNKKK