| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0151 |
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| Symbol | |
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| ID | 6241653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 167683 |
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| End bp | 169524 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642591913 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001856390 |
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| Protein GI | 186474920 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.435912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAC GCTCGCCCTC CCTCCTTGCA GCGCCTCGCA TCGTCGATCT GATTGCGCAG
CGCGATTTGT CAGCAGTGTT TCAGCCGATC GTCGATTTTG AAGACGGCGC GATTCTCGGT
TACGAAGGAC TGATTCGCGG GCCGGCCGGC ACGGCGCTAG AAACGCCGTA TGCGCTGTTC
GCACAGGCGG CTGCCGAAGG CAGCGTGATC GCGCTGGAGC GCGCGGCCGC GCACACCTGC
ATCGAGGCGT TCGCCCGGCT CAAGTGCGAG TGCAAGCTGT TCCTGAATTT CAGCGCAGGC
GCGATCCGCC AGCTGGCCGA CGAGCGGGAC GACACTTTCA CGATGTTGCG CAATATGGGC
GTCCACGCAG GACGCATCGT GATCGAACTG ACCGAGCAGA GCGCAATCCC CGACGTTGCC
AGCTTTCTGC CTGCCATTTC CCTGCTGCGC ATGGCAGGCG CGCAGTTCGC GCTCGACGAC
TACGGCACCG CTAACGCCAG CATGAATTTA TGGGTGCGTC TGCGGCCCGA CGTCGTGAAG
ATCGACCGCT TCTTCATTCA CGACATCGCC AGCGACCCGC TCAAGTTCGA AGCCGTGAAG
GCGATGCAGC ATTTTGCAGC CGCGAGCGGT GCGCGCCTCG TCGCCGAAGG AATCGAAAAG
GAGGCGGATC TGATCGTCGT GCGCGACATG GGCATCGCCT GCGGGCAGGG CTATTTCCTC
GGCAAGCCGA GCGCGCACCC GCCCCCCCTG GTTGCGGATA ACGCCCGAGA GGCGCTGCGT
TCCCGTCACA TCGCCGTGTT TCCGGAAGCG ACGCGGGCGG TGGTGAGCGC ATCGCCGTCG
GGCGGCATGG CGTCGACAAA GATGGTCGTG CATGCGCCTG CGCTGCCGCG CGACGCGACG
AACAACGACG TGCTCGAACT GTTCAACCGC CTGCCGAACC TGCATGCCGT CGCCGTCGTC
GAGGAGGACG AACCTGTCGC GCTGATCAAT CGCCGTGCAT TCATGGACCG GTACGCGCTG
CCCTATCATC GCGAACTGTT CGGCAAGCGG CCCTGCATGC TGTTCGCGAA CGAGTCGCCC
GTCGTGATCG AGAAGTCGAT GACAGTCGAG GACATGGCCA AGCTGCTCGC CAACGACGAC
CAGCGTTATC TCGCGGACGG CTTCGTCATC ACCGAGCACG GCCAATACGT GGGGCTCGGC
ACGGGTGAAA GCCTCGTGCG CGCGGTCACG GAAGTGCGCA TCGAAGCGGC CCGCTACGCG
AATCCGCTCA CGTTCCTGCC AGGCAACATT CCCATCAGCT CGCACATCAC GCGGCTGCTC
AGTCACGAAG CGGGCTTCCA TGCGTGCTAC GCTGATCTGA ATCACTTCAA GCCGTTCAAC
GACCAGTACG GTTACTGGCA AGGCGATGAA GTGCTGAAAT TTGCCGCTCA TGTGCTGGCC
GACGTATGCG ATCCGACCCG CGATTTTCTC GGGCACGTCG GTGGTGACGA CTTCCTGGTG
CTGTTCCAGA GCGAAGACTG GCACGCGCGC GCGCAACGCG CCATTCACAC GTTCAACGAA
GGCGCGCAGC GCTTCTATGG GCCGGGCGAC CGTCTGGCGG GCGGTATCCA CGGCGAGGAC
CGGCGCGGCA ATCCGAGCTT CTACGGCTTC GTGACGATGG CGATCGGCTG CGTGCAGGTA
CAGCCGCAAT GCAACGATGC GGCGTACAGC AGCGAGGACA TCGCGTCGGT GGCGGCGCTC
GCGAAACGCC GCGCGAAGCG CGAAGCGTCC GGTCTCGTGA TGGTCGAGTT CAACGAAGGC
CGGATGGTAC TGCAAGGGCG CACGACGGCT ACCGTCGACT GA
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| Protein sequence | MSQRSPSLLA APRIVDLIAQ RDLSAVFQPI VDFEDGAILG YEGLIRGPAG TALETPYALF
AQAAAEGSVI ALERAAAHTC IEAFARLKCE CKLFLNFSAG AIRQLADERD DTFTMLRNMG
VHAGRIVIEL TEQSAIPDVA SFLPAISLLR MAGAQFALDD YGTANASMNL WVRLRPDVVK
IDRFFIHDIA SDPLKFEAVK AMQHFAAASG ARLVAEGIEK EADLIVVRDM GIACGQGYFL
GKPSAHPPPL VADNAREALR SRHIAVFPEA TRAVVSASPS GGMASTKMVV HAPALPRDAT
NNDVLELFNR LPNLHAVAVV EEDEPVALIN RRAFMDRYAL PYHRELFGKR PCMLFANESP
VVIEKSMTVE DMAKLLANDD QRYLADGFVI TEHGQYVGLG TGESLVRAVT EVRIEAARYA
NPLTFLPGNI PISSHITRLL SHEAGFHACY ADLNHFKPFN DQYGYWQGDE VLKFAAHVLA
DVCDPTRDFL GHVGGDDFLV LFQSEDWHAR AQRAIHTFNE GAQRFYGPGD RLAGGIHGED
RRGNPSFYGF VTMAIGCVQV QPQCNDAAYS SEDIASVAAL AKRRAKREAS GLVMVEFNEG
RMVLQGRTTA TVD
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