Gene Bphy_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0114 
Symbol 
ID6241617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp123950 
End bp125161 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content70% 
IMG OID642591876 
Productmajor facilitator transporter 
Protein accessionYP_001856354 
Protein GI186474884 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGACC GCCCCTCCGA ATCCGCATCC ATTCCCGCCG CGCATCGCAA TCTGCCCACG 
AGCGCGCGCA AGCGTGCGCG TTACGCGACG ATGGCGCTCT TCCTGATTGC CGGGATGATG
TATGCGTCAT GGGGCGTCCA CGTGCCGACC GTGCGCGACC GCTTCCATTT GAATCCGGCG
ATGCTGTCTG TCGCGCTGTT CGCAGTCGCG GGCGGCTCGA TCGGCGCGAT GGTGACGAAC
GGGCCGTGGA TCGCGCGCGT CGGCACGCGC CGCGCATGTC TGGCGGGCGG CCTTGTTATG
TCGGCGTGCG CGGCGCTGAT TCTCGTCGTG CCGTCGTACT GGATGCTGCT CGTGTTGCTC
GCGTTCTTTG GCGCCGGGAT GGCGACACTC GACGTCGCGA TGAACGCCGA AGCCAGCGCC
GTCGAAGAAG CGCTCGGCCG GCCGATCATG TCGTCGCTGC ACGGCATGTT CAGCCTCGGC
GGGATGGCAG GCGCGGCCGT CGGCGGCGCG GCGCTCGCGC ACGGCATGGC GCCTGCCGTG
CATCTGCTGC TCGCAGCGCT GGTGAGTGCG GGCGTGCTGC TGGCGGCGTG CCCCGCGGTG
CTGCCCCACG TCCCGCATTC CGAGCATCCA GATGCGCACG CGCCGCGCGG CAACCGCTGG
CGCTCGCCGG CACTGTGGGC ACTCGGCGCG ATCGCACTGG TCGCGCTGAT CGCGGAAGGC
GCGATGTACG ACTGGGCGAC GGTGTACATG CGCGACGTCG TCGCATCGAC GCCCGCTGTG
TCGAGCGCCG CCTACGCGGC GTTCTCAGGC GGCATGGCCG TCGCGCGTTT CGCCGGCGAC
GCCGTGCGTG CGCGTTTCGG CGCGCCGCAG CTGACTGCCG CGAGCGCGTC GCTGGCCTGC
GCGGGCATGA TCGGCGCGCT GCTTCTGCCG CATCCCGTCG CCGCGTTGAC CGGTTTCACG
ATGATGGGCC TCGGCCTCGC CAACATGATG CCCGTGCTGT TCGCGGCAGC GGCGCGCGTG
AAGGGAATTC CCGCCGCCGA AGGTCTCGCG CACGTCGCGG GGCTGGCGTA CTTCGGCTTG
CTGCTCGGAC CGGTGATCAT CGGCGGGGTC GCGCAGGTGA CGAATCTGCC CATCGGCCTG
TCCGTCGTCG CGTTGTGTGC GGCGCTCGTC GCGTTCGCGG CACCCAAGGT ATTGCGCCGG
CTCCGTATCT GA
 
Protein sequence
MSDRPSESAS IPAAHRNLPT SARKRARYAT MALFLIAGMM YASWGVHVPT VRDRFHLNPA 
MLSVALFAVA GGSIGAMVTN GPWIARVGTR RACLAGGLVM SACAALILVV PSYWMLLVLL
AFFGAGMATL DVAMNAEASA VEEALGRPIM SSLHGMFSLG GMAGAAVGGA ALAHGMAPAV
HLLLAALVSA GVLLAACPAV LPHVPHSEHP DAHAPRGNRW RSPALWALGA IALVALIAEG
AMYDWATVYM RDVVASTPAV SSAAYAAFSG GMAVARFAGD AVRARFGAPQ LTAASASLAC
AGMIGALLLP HPVAALTGFT MMGLGLANMM PVLFAAAARV KGIPAAEGLA HVAGLAYFGL
LLGPVIIGGV AQVTNLPIGL SVVALCAALV AFAAPKVLRR LRI