Gene Bphy_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0100 
Symbol 
ID6241604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp110381 
End bp111022 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content67% 
IMG OID642591863 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001856341 
Protein GI186474871 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCACT ACCTGCCGAT CCTGCTGCAA ATCGCCATTG TTTACCTGGT GGCGCTCATC 
AGTCCGGGCC CCAACTTTTT CATGATCACG CAGCTGTCGC TGGCGGGACG CCGCGGGCTC
GGCGCCGCGT CGGCGCTCGG CGTCGGCACG GGATCGACCA TCTGGGCTTC GCTCGCCATG
CTCGGCTTCG CAACCGTGCT GCAGCGGATC GACTGGCTGT ACAACGGCAT CCGCATCGCG
GGCGCGGTCT ACCTGGTGTG GTTCGGCATC AAGCTCGTGT GCGCCAGCAC AAAGCGCGGC
GAAGCCATCA TCGTGACTGT GGAAACGCCG CTTGCCAACG ACCGCGCGGC GTATTGGCGC
GCATGGCGCT CGGGCGCGCT CACGTGTCTG ACCAATCCGA AATCGTGTGC GTTCTGGACC
AGTATCTTCG CGACGCTGTT CCCCGCGCAT CCGCCGCTGT GGTTCTATGG CGTGGCGCTC
GCGATGATCG GCTGCATGTC GGTCGGCTGG TACGGCAGCG TGGCGCTGAT GTTCGCGACC
GAGCGCACGC AGCGCGGCTA TCGCCGCCTG CGCCGGCCCA TCGACGGCGT GTGCGGCGCC
GTGCTCGTGG GTCTCGGCGC GAAGCTCGCA GCCGAAAGCT GA
 
Protein sequence
MHHYLPILLQ IAIVYLVALI SPGPNFFMIT QLSLAGRRGL GAASALGVGT GSTIWASLAM 
LGFATVLQRI DWLYNGIRIA GAVYLVWFGI KLVCASTKRG EAIIVTVETP LANDRAAYWR
AWRSGALTCL TNPKSCAFWT SIFATLFPAH PPLWFYGVAL AMIGCMSVGW YGSVALMFAT
ERTQRGYRRL RRPIDGVCGA VLVGLGAKLA AES