| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0076 |
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| Symbol | dapF |
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| ID | 6241580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 86034 |
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| End bp | 86894 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642591839 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001856317 |
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| Protein GI | 186474847 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA AATTCACCAA AATGCACGGC GCGGGCAATG ACTTCGTCGT GCTCGATGGC
TACACGCAAC CGCTCAACCT GACGGAAACC CAGGTGCGCG CACTGGCGAA CCGGCATTTC
GGCGTCGGCG CGGACCAGTT GCTGGTGGTC GAAAAACCGA CCGTCGATGG CGTCGATTTC
AGATACCGCA TTTTCAATTG CGACGGCGGC GAGGTCGAGC ACTGCGGCAA CGGCGCGCGC
TGCTTCGTCA AGTTCGTGCG TGACTCGCGC CTCACCGACA AGCGCAGCGT CCGCGTGCAG
GTTCAGAAAG GCGTGATCAC GCTGACCATG CAGGACAACG GCGAGGTCGT CGTCGATATG
GGCGCGCCCG TGTTCGAGCC GGTCCAGGTG CCGTTCGACG CAAGCGGTGT CGAAGCGCGC
CGCGAAGGCA ACGACACGCT GTATGCGCTA GAGGTCAACG GCGAAACGCG CTGGGTTTCC
GTCGTGTCGA TGGGGAATCC GCATGCGGTG CAGGTGGTGG ATGATGTCGA GGCGTTTCCC
GTGCTGGTCG ACGGGCCCGT CATCGAGACA CACCCGCGCT TTCCGCAGCG GGTCAATGCC
GGCTTCATGC AGATCGTCGG ACGCAGCGAG GTGAAGCTGC GCGTCTACGA ACGCGGCGCG
GGCGAAACAC TCGCGTGCGG CACGGGCGCA TGCGCGGCCG TGGCCGCGGG CATTCGCCGC
GGCCTGCTGG ATGCCCCCGT CAAGGTTCAC ACGCACGGCG GCACGCTGAC CATCACGTGG
AACGGCGAGT CCGCATCGTC GTTGATGATG GCGGGGCCGG CCGCTACCGT GTTCGAAGGC
GAAATCGAAC TGGCCGACTG A
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| Protein sequence | MKLKFTKMHG AGNDFVVLDG YTQPLNLTET QVRALANRHF GVGADQLLVV EKPTVDGVDF
RYRIFNCDGG EVEHCGNGAR CFVKFVRDSR LTDKRSVRVQ VQKGVITLTM QDNGEVVVDM
GAPVFEPVQV PFDASGVEAR REGNDTLYAL EVNGETRWVS VVSMGNPHAV QVVDDVEAFP
VLVDGPVIET HPRFPQRVNA GFMQIVGRSE VKLRVYERGA GETLACGTGA CAAVAAGIRR
GLLDAPVKVH THGGTLTITW NGESASSLMM AGPAATVFEG EIELAD
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