Gene Bphy_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0062 
SymbolslmA 
ID6241566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp71569 
End bp72267 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content65% 
IMG OID642591825 
Productnucleoid occlusion protein 
Protein accessionYP_001856303 
Protein GI186474833 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.249336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCA TCCGCAAGCA TGACGACGTA ACCGAAGATC AGCCGGCCGC ACCGCGCGCG 
ACGCGCCTGA AACCGGGCGA GCGGCGCGTG CATATCTTGC AGACGCTCGC GGCAATGCTG
GAGGCGCCGA AGAACGAAAA GATCACCACG GCGGCGCTGG CCGCGCGCCT CGGCGTATCG
GAGGCGGCGC TCTACCGTCA TTTCGCGAGC AAGGCGCAGA TGTTCGAAGG GCTGATCGAG
TTCATCGAGC AGACGCTGTT CGGCCTCATC AACCAGATCA TCGCGAAAGA GCCGAATGGC
GTCCTGCAGG CGCGCGCGAT CGCGCTTACG CTGCTCAACT TTTCGGCGAA GAATCCGGGC
ATGACGCGCG TGCTGACGTG CGAAGCGCTC GTCGGCGAAC ATGAGCGGCT TACCGAACGG
GTCAACCAGT TGCTCGAGCG CGTCGAGGCG TCGCTCAAAC AGTGTCTGCG ACTGGGACTG
ATGGACGCAT CCCGTCAGGC GGGGCAGGCG GCCCCTGTAG CAGGAACCGG CCACGCCGAA
TCAGACACGA TACCGCTGCC CGTCGACTAC GACCCCGTCG CGCGCGCGAG TCTTTTGCTC
AGCTACATCA TCGGACGCTG GCATCGCTTC GTGCGCAGCG GCTTCTCGCG CGCGCCCGTC
GAACAGGCCG ATGCACAACT GCGGCTGATC CTTCAGTAA
 
Protein sequence
MQPIRKHDDV TEDQPAAPRA TRLKPGERRV HILQTLAAML EAPKNEKITT AALAARLGVS 
EAALYRHFAS KAQMFEGLIE FIEQTLFGLI NQIIAKEPNG VLQARAIALT LLNFSAKNPG
MTRVLTCEAL VGEHERLTER VNQLLERVEA SLKQCLRLGL MDASRQAGQA APVAGTGHAE
SDTIPLPVDY DPVARASLLL SYIIGRWHRF VRSGFSRAPV EQADAQLRLI LQ