Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0062 |
Symbol | slmA |
ID | 6241566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 71569 |
End bp | 72267 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642591825 |
Product | nucleoid occlusion protein |
Protein accession | YP_001856303 |
Protein GI | 186474833 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.249336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCCA TCCGCAAGCA TGACGACGTA ACCGAAGATC AGCCGGCCGC ACCGCGCGCG ACGCGCCTGA AACCGGGCGA GCGGCGCGTG CATATCTTGC AGACGCTCGC GGCAATGCTG GAGGCGCCGA AGAACGAAAA GATCACCACG GCGGCGCTGG CCGCGCGCCT CGGCGTATCG GAGGCGGCGC TCTACCGTCA TTTCGCGAGC AAGGCGCAGA TGTTCGAAGG GCTGATCGAG TTCATCGAGC AGACGCTGTT CGGCCTCATC AACCAGATCA TCGCGAAAGA GCCGAATGGC GTCCTGCAGG CGCGCGCGAT CGCGCTTACG CTGCTCAACT TTTCGGCGAA GAATCCGGGC ATGACGCGCG TGCTGACGTG CGAAGCGCTC GTCGGCGAAC ATGAGCGGCT TACCGAACGG GTCAACCAGT TGCTCGAGCG CGTCGAGGCG TCGCTCAAAC AGTGTCTGCG ACTGGGACTG ATGGACGCAT CCCGTCAGGC GGGGCAGGCG GCCCCTGTAG CAGGAACCGG CCACGCCGAA TCAGACACGA TACCGCTGCC CGTCGACTAC GACCCCGTCG CGCGCGCGAG TCTTTTGCTC AGCTACATCA TCGGACGCTG GCATCGCTTC GTGCGCAGCG GCTTCTCGCG CGCGCCCGTC GAACAGGCCG ATGCACAACT GCGGCTGATC CTTCAGTAA
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Protein sequence | MQPIRKHDDV TEDQPAAPRA TRLKPGERRV HILQTLAAML EAPKNEKITT AALAARLGVS EAALYRHFAS KAQMFEGLIE FIEQTLFGLI NQIIAKEPNG VLQARAIALT LLNFSAKNPG MTRVLTCEAL VGEHERLTER VNQLLERVEA SLKQCLRLGL MDASRQAGQA APVAGTGHAE SDTIPLPVDY DPVARASLLL SYIIGRWHRF VRSGFSRAPV EQADAQLRLI LQ
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