| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0055 |
|---|
| Symbol | gatB |
|---|
| ID | 6241559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 63660 |
|---|
| End bp | 65135 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642591818 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
|---|
| Protein accession | YP_001856296 |
|---|
| Protein GI | 186474826 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
|---|
| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACAC AATGGGAAGT GGTTATCGGT CTCGAGACCC ACGCGCAACT GTCGACGGTA
TCGAAAATCT TCTCGGGCGC GGCCACGCAG TTCGGCGCCG CGCCGAACAC GCAGGCCTGC
CCCGTCGACC TGGCCCTTCC GGGCGTGCTG CCCGTGATGA ACAAAGGCGC GGTGGAGCGC
GCAATCCAGT TCGGTCTCGC GATCGATGCG ACCATCGCGC CGCGCAGCAT CTTCGCGCGC
AAGAACTACT TCTACCCTGA TCTGCCGAAG GGCTATCAGA TCAGCCAGTA CGAAATCCCC
GTCGTGCAGG GCGGCCAGAT CACGATTCAG GTTCCCGCCA ATGAAAAGGC CGGAAAAGAA
GCGTACGAGA AGACCATCAA CCTGACACGT GCTCACCTCG AAGAAGATGC GGGCAAGTCG
CTGCACGAAG ACTTCGCGGG CATGACGGGC ATCGACCTGA ATCGCGCGGG CACGCCGCTG
CTCGAAATCG TTACCGAACC GGAAATGCGC AGCGCCGCCG AGGCCGTTGC CTACGCGAAG
GCGCTACATG GTCTGGTGGT GTGGCTCGGC ATTTGCGATG GCAACATGCA GGAAGGCTCG
TTCCGCTGTG ACGCGAACGT GTCGGTGCGT CCCGTGGGGC AAAAAGAATT CGGCACGCGC
GCCGAAATCA AGAACCTGAA CTCGTTTCGC TTCCTGGAAG AAGCGATCCA GTACGAGGTG
CGGCGTCAGA TCGAACTGAT CGAAGACGGC GGCACCGTGG TGCAGGAAAC GCGTCTGTAC
GATCCAGACA AGCGCGAAAC GCGTTCGATG CGCAGCAAGG AAGACGCCCA CGATTACCGC
TATTTCCCCG ATCCCGATCT GATGCCCCTC GTGATCGACG CATCGTGGGT CGAGCGGGTG
AAGGGCGAGC TGCCGGAACT GCCCGCCGCG ATGCAGAAGC GCTTCGTCGA TCAATATGGC
CTCACGCCAT ACGATGCGGG CGTCGTCACG GCGGGCAAGG CAATGGCCGC GTACTACGAA
GCCGTCGTGG CGAAGGTCGG CGCGGCGCAG GCGAAGGTCG CGGCGAACTG GCTGATGGGC
GAAGTCTCGT CGCAGTTGAA CCGCGAAGGC CTCGACATTG CCGACAGCCC GGTATCGGCT
GCGCAACTCG CCCTCGTTCT GCAGCGTATC GCCGACGGCA CGATCTCGAA CAAGATCGCC
AAGGAAATTT TCCTCGCCAT CTGGGAGGAG AAGGCCACCG ACGAAGCCGC CGCCGACCGC
ATCATCGAAG CGAAGGGTCT TAAGCAGATC TCCGATACAG GCGCGCTCGA AGCGATCATC
GACGAAGTGC TCGCCGCGAA CCAGAAGTCG GTCGAGGAAT TCCGCGCCGG CAAGGAAAAG
GCGTTCAACG CGCTGATCGG ACAGGCGATG AAGGCGACCA AGGGCAAGGC GAATCCGCAG
CAGGTCAACG AACTGCTGAA GAAGAAGCTC GGCTGA
|
|---|
| Protein sequence | MATQWEVVIG LETHAQLSTV SKIFSGAATQ FGAAPNTQAC PVDLALPGVL PVMNKGAVER
AIQFGLAIDA TIAPRSIFAR KNYFYPDLPK GYQISQYEIP VVQGGQITIQ VPANEKAGKE
AYEKTINLTR AHLEEDAGKS LHEDFAGMTG IDLNRAGTPL LEIVTEPEMR SAAEAVAYAK
ALHGLVVWLG ICDGNMQEGS FRCDANVSVR PVGQKEFGTR AEIKNLNSFR FLEEAIQYEV
RRQIELIEDG GTVVQETRLY DPDKRETRSM RSKEDAHDYR YFPDPDLMPL VIDASWVERV
KGELPELPAA MQKRFVDQYG LTPYDAGVVT AGKAMAAYYE AVVAKVGAAQ AKVAANWLMG
EVSSQLNREG LDIADSPVSA AQLALVLQRI ADGTISNKIA KEIFLAIWEE KATDEAAADR
IIEAKGLKQI SDTGALEAII DEVLAANQKS VEEFRAGKEK AFNALIGQAM KATKGKANPQ
QVNELLKKKL G
|
|---|
| |