Gene Bphy_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0036 
Symbolfmt 
ID6241540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp42691 
End bp43674 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content68% 
IMG OID642591798 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_001856277 
Protein GI186474807 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACA CCTTGCGCGT CATTTTTGCC GGTACGCCGG AGTTCGCCGC CGCCGCGTTG 
GCCGCCATTC ACGAAGCGGG CTTCCCGGTG CCGCTGGTGC TCACCCAGCC GGACCGCCCG
GCGGGACGCG GCATGAAGCT GCAGGCCAGC CCCGTCAAGC GTTACGCGCA AGAGCACGGC
ATCGAAGTGG CGCAGCCGCC TTCGCTGCGC CGTAACGGCA AGTATCCAGC GCAAGCCACT
GCCGCCATCG AGCAGCTGCG GGCGACACCG CACGACGTCA TGGTCGTTGC CGCCTACGGG
CTGTTGTTGC CGCAGGAAGT GCTCGACATT GCGCCGCACG GCTGCATCAA TATTCACGCG
TCGCTGCTGC CGCGCTGGCG GGGCGCGGCG CCGATCCACC GTGCAATCGA AGCAGGCGAC
GCCGAAACAG GCATCACGCT GATGCAGATG GACGCCGGCC TCGATACGGG CGCGATGATT
TCCGAGGTCC GCACCGCGAT CGCCGGCACA GACACCACTG CGACGCTGCA CGACCGGCTT
GCCGAAGCGG GCGCAAAGCT GATAGTCGAC GCGCTAGTCG AACTGGAACG CAGCGGCAAG
CTGGCGTCGA TCCCGCAGCC GGCCGCAGGC GCGACCTACG CCGAGAAAAT CGCCAAGCAC
GAAGCGGCGC TCGACTGGCG ACGCCCCGCG GCGGAACTGG CCCGTCAGGT TCGCGCGTTC
GACCCGTTCC CCGGCGGCGC CGCGACGCTC GACGGCGCGG TGCTCAAGCT CTGGTCCGCT
GCCGCAGTCG ACGCTTCGTG CAAGGCAGAA CCCGGCACGA TTGTGGAGGT GTCGCCCGAA
GGCGTTGTCG TGGCATGCGG CGATGGCGCA TTGCGCATCA CGCAACTCCA GAAGCCGGGC
GGCAAGCGCC TGCCGGTGCG CGATTTTCTC GCCGGCTCGA CGCTCGCGGC GGGCCAGCGC
TTCGAACTCG CACAGCCACA ATAA
 
Protein sequence
MSHTLRVIFA GTPEFAAAAL AAIHEAGFPV PLVLTQPDRP AGRGMKLQAS PVKRYAQEHG 
IEVAQPPSLR RNGKYPAQAT AAIEQLRATP HDVMVVAAYG LLLPQEVLDI APHGCINIHA
SLLPRWRGAA PIHRAIEAGD AETGITLMQM DAGLDTGAMI SEVRTAIAGT DTTATLHDRL
AEAGAKLIVD ALVELERSGK LASIPQPAAG ATYAEKIAKH EAALDWRRPA AELARQVRAF
DPFPGGAATL DGAVLKLWSA AAVDASCKAE PGTIVEVSPE GVVVACGDGA LRITQLQKPG
GKRLPVRDFL AGSTLAAGQR FELAQPQ