| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0035 |
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| Symbol | def |
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| ID | 6241539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 42162 |
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| End bp | 42665 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642591797 |
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| Product | peptide deformylase |
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| Protein accession | YP_001856276 |
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| Protein GI | 186474806 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTTAC TCAACATCCT CAATTACCCG GACAAGCGGC TGCACAAGGT TGCGAAACCG
GTCGAGAAGG TCGATGACCG TATTCGCAAG CTCGTCGCCG ACATGGCCGA GACGATGTAC
GCCGCGCCCG GCGTGGGTCT GGCGGCGACG CAGGTCGACG TGCACGAGCG CGTGATCGTG
ATCGACGTGT CCGACACGCA CGAGGAACTG CGCGCGTTCA TCAATCCGGA AATTCTCTGG
TCGAGCGACG AGCGGAAGAT CCACGAAGAA GGCTGCCTGT CGGTGCCGGG TATTTACGAC
AACGTCGAGC GGGCCGAGAA GGTGCGTGTG CGTGCGATGA ACGAGAAAGG GGAAACCTTC
GAACTGGATT GCGAAGGGCT GCTCGCCGTT TGCATCCAGC ACGAAATGGA TCACCTGATG
GGCAAGGTGT TCGTCGAATA TCTGTCGCCG CTCAAGCAGA CGCGCATCAA GAGCAAGATG
AAGAAGCTCG CGCACGCAAT GTGA
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| Protein sequence | MALLNILNYP DKRLHKVAKP VEKVDDRIRK LVADMAETMY AAPGVGLAAT QVDVHERVIV
IDVSDTHEEL RAFINPEILW SSDERKIHEE GCLSVPGIYD NVERAEKVRV RAMNEKGETF
ELDCEGLLAV CIQHEMDHLM GKVFVEYLSP LKQTRIKSKM KKLAHAM
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