| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0032 |
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| Symbol | |
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| ID | 6241536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 37341 |
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| End bp | 40067 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642591794 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001856273 |
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| Protein GI | 186474803 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTACCA AACCCGGGTG GGAAAACCCG CGGTACCGGC CCGAATCCAC CAATTTATTT
TCAGTCATGT CCAAAGCACT GATCATCGCC GAAAAGCCAT CCGTCGCGAA CGACATCGCG
CGGGCTTTGG GCGGGTTTAC CAAGCATGAC GAGTACTTCG AAAGCGACGA TTTCGTCCTT
TCGTCGGCAG TCGGCCATCT GCTGGAGATT GCCGCGCCCG AAGAATATGA AGTCAAACGG
GGGAAATGGA GTTTTGCCAA TCTTCCCGTT ATTCCGCCCC ATTTCGACCT GAATCCGATC
GCGAAAAGCG AGTCGCGTCT GAAGGTGCTG AACAAGCTGA TCAAGCGGAA AGACGTCGAC
CGTCTGATCA ACGCCTGTGA CGCGGGGCGC GAGGGCGAAC TGATTTTCCG CCTGATCGCG
CAGCACGCGA AAGCGAAGCA GCCGGTGCAG CGCCTGTGGC TGCAGTCGAT GACGCCCGCC
GCTATCCGCG AGGGCTTCGC GCAACTGCGT ACCGACGCCG AGATGCAACC GCTCGCGGAT
GCCGCCCGCT GCCGCTCGGA AGCGGACTGG CTGGTCGGCA TCAACGGCAC GCGCGCGATG
ACCGCGTTCA ACAGCAAGGG CGGCGGCTTC TTCCTGACCA CCGTCGGGCG CGTGCAGACG
CCGACGCTGT CTATCGTCGT CGAGCGCGAA GAAAAAATTC GCCGCTTCGT GCCGCGTGAC
TACTGGGAAG TGAAGGCCGA GTTCGTCTGC GCGTCGGGCT TCTACGAAGG CCGCTGGTAC
GACCCTAAGT TCAAGAAAGA CGAGTTTGAT CCGGAAAAGC GCGATTCGCG CCTCTGGAGC
CTGCCGGCTG CGGAAACGAT CGTCGCAGCC TGTCGAGGCC AGACGGGCAA TGTGACGGAA
GAATCGAAGC CGTCGACGCA GCTGTCGCCA GCGCTGTTCG ACCTGACCAG CCTGCAGCGT
GAAGCCAACG GCCGCTTCGG CTTTTCGGCC AAGAACACGC TGGGTCTCGC CCAGGCGCTG
TACGAGAAGC ACAAGGTGCT GACCTATCCG CGTACCGACG CGCGCGCGCT GCCGGAAGAC
TATCTGGAAA CGGTCAAGCA CACGATGGAG ATGCTCAAGG AGAGCAACAA CTATCTCCCG
CACGCGAAGC AGGTGCTCGA CAAGGGCTGG GTGAAGCCGA ACAAGCGCAT CTTCGACAAT
TCGAAGATCA GCGACCACTT CGCCATCATC CCGACCCTGC AGGCGCCGAA AGCGCTCTCC
GAGCCTGAGC AGAAGCTGTA TGACCTCGTC GTGAAGCGCT TCCTCGCCGT GTTCTTCCCG
GCTGCCGAGT ACCGCGTCAC CACCCGGATC ACGGAAGTCG TCGGCCATCA TTTCAAGACA
GAAGGCAAGG TGCTCGTCGA GCCGGGTTGG CTGCAGGTCT ACGGCCGCGA GACGGGCGGT
GAAGACGCGA ACCTCGTCCC CGTGCAGAAG GACGAGAAGG TCAAGACCGA CAAGATCGCT
GCGCAACAGC TCGTCACGAA GCCGCCCGCA CGCTACAACG AAGCCACGCT GCTTTCGGCG
ATGGAAGGCG CAGGAAAGCT CGTCGAAGAC GACGAACTGC GCGAAGCGAT GGCCGCGAAG
GGTCTCGGCA CGCCGGCTAC GCGTGCAGCC ATCATCGAAG GTCTGCTCGG CGAAAAGTAT
CTGGTCCGCG AAGGGCGCGA ACTGATTCCG ACCGCGAAGG CTTTCCAGCT GATGACGCTG
CTGCGCGGCC TCGACGTGAA GGAACTGACC GCACCGGAAC TGACGGGCGA ATGGGAATAC
AAGCTGTCGC AGATGGAACG CGGCAAGCTG CCGCGCGACG CCTTCATGCA GGAGATCGCC
CGCATGACGC AGACCATCGT CAAGCGCGCG AAGGAATACG ATTCCGACAC CATCCCCGGC
GATTACGCGA CGCTGCAGAC GCCCTGCCCC AACTGCGGTG GCCAGGTGAA GGAAAACTAT
CGGCGCTTTG CATGTACCAA GTGCGAATTC TCGATGTCGA AGATTCCGGG CGGCCGCCAG
TTCGAAATCG AGGAAGTCGA GGAATTGCTG CAGAAGAAGC AAATCGGTCC GCTGTCGGGC
TTCCGCAGCA AGATGGGTCG TCCGTTCTCG GCAATCCTCA AGCTGTCGTT CGACGACGAA
ACGAAGAACT TCAAGCTCGA ATTCGACTTC GGCCAGGATC AGGGCGGCGA AGACGGCGAG
GCGCCGGACT TCTCTGAACA GCAACCGGTC GGCGCGTGTC CGAAGTGCAG CGGCAAGGTG
TTCGAGCACG GCATGAGTTA CGTCTGCGAA AACTCTGTCG CGAATCCAAA GACCTGCGAC
TTCCGTTCGG GCAAGGTGAT CCTGCAGCAG GAAATTGCGC GCGAGCAAAT GGCGAAGCTG
CTGGAAAACG GACGCACCGA CCTGCTGACG AACTTCAAGT CGTCGCGCAC TGGCCGCAAC
TTCAAGGCAT TCCTCGTCAA GCAGAACGAC GGCAAGATCG GCTTCGAGTT CGAGAAGAAG
GAGCCGAAGG AAGGCGCGGC AAAGACGGCG GCTGCGAAGG CCGCTGCCAA GGCGGCGCCT
GAATCCGCGA CTGGCGAAGC GGCGAATGAG GCCACACCCG TGAAGAAGGC CGCAACAAAG
ACGGCAGCGG CCAAGAAGGC ACCGGCCAAA AAAGCTGCCG CGAAAACCTC GGCTGCTAAA
TCTGCCGCTC GCAAGACGGG TTCGTAA
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| Protein sequence | MGTKPGWENP RYRPESTNLF SVMSKALIIA EKPSVANDIA RALGGFTKHD EYFESDDFVL
SSAVGHLLEI AAPEEYEVKR GKWSFANLPV IPPHFDLNPI AKSESRLKVL NKLIKRKDVD
RLINACDAGR EGELIFRLIA QHAKAKQPVQ RLWLQSMTPA AIREGFAQLR TDAEMQPLAD
AARCRSEADW LVGINGTRAM TAFNSKGGGF FLTTVGRVQT PTLSIVVERE EKIRRFVPRD
YWEVKAEFVC ASGFYEGRWY DPKFKKDEFD PEKRDSRLWS LPAAETIVAA CRGQTGNVTE
ESKPSTQLSP ALFDLTSLQR EANGRFGFSA KNTLGLAQAL YEKHKVLTYP RTDARALPED
YLETVKHTME MLKESNNYLP HAKQVLDKGW VKPNKRIFDN SKISDHFAII PTLQAPKALS
EPEQKLYDLV VKRFLAVFFP AAEYRVTTRI TEVVGHHFKT EGKVLVEPGW LQVYGRETGG
EDANLVPVQK DEKVKTDKIA AQQLVTKPPA RYNEATLLSA MEGAGKLVED DELREAMAAK
GLGTPATRAA IIEGLLGEKY LVREGRELIP TAKAFQLMTL LRGLDVKELT APELTGEWEY
KLSQMERGKL PRDAFMQEIA RMTQTIVKRA KEYDSDTIPG DYATLQTPCP NCGGQVKENY
RRFACTKCEF SMSKIPGGRQ FEIEEVEELL QKKQIGPLSG FRSKMGRPFS AILKLSFDDE
TKNFKLEFDF GQDQGGEDGE APDFSEQQPV GACPKCSGKV FEHGMSYVCE NSVANPKTCD
FRSGKVILQQ EIAREQMAKL LENGRTDLLT NFKSSRTGRN FKAFLVKQND GKIGFEFEKK
EPKEGAAKTA AAKAAAKAAP ESATGEAANE ATPVKKAATK TAAAKKAPAK KAAAKTSAAK
SAARKTGS
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