Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0016 |
Symbol | |
ID | 6241521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 18797 |
End bp | 19588 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642591778 |
Product | extracellular solute-binding protein |
Protein accession | YP_001856258 |
Protein GI | 186474788 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.62462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.384726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGG TTAAGAGTCT GCTGATGCTG TCGTGCGGGT TCGCATCGGT GGCGGCCGTG TCGGCGATAG CCGCCGACGC GACGTCGCTG CGCTATGGCC TCGAGGCGCA ATATCCGCCG TTTGAATCGA AGGGTGCGAA TGGCGAGTTG CAGGGCTTCG ATATCGATAT CGGCAACGCC GTCTGCAAGA CCGCAAATCT GAAATGCAGC TGGGTTGAAA CGTCGTTCGA CGGCCTGATT CCCGCTTTGC AGGGCCGCAA GTTCGACGCG ATCAACTCGG CGATGAACGC TACGGAAAAG CGCCGCCAGG CGATTGATTT CACCAACGTG ATCTACCGCG TGCCGACGCA ACTGATCGCG CGCAAGGACA GCGGACTGCA GCCGACGCCC GAATCTCTGA AGGGCAAGCG CGTCGGCGTG TTGCAGGCGT CGATTCAGGA GACGTATGCG AAGGCCCACT GGGAAAGCGC GGGCGTCGCT GTGGTGCCGT ATCAGGACCA GAACCAGGTG TACGCGGATC TCGTCGCCGG CCGCCTCGAT GCGACGCTCG TGCTCGCGCC GGCTGGGCAG ACGGGTTTCC TGTCACGCCC TGACGGCAAG GACTTCGCGT TCGTCGGCGA GCCGGTGCGT GACGACAAGA TTCTCGGCAG CGGCATCGCA TTCGGGATTC GCAAGGGCGA CACGGCGCTG CGCAACCAGC TGAACGCGGC GATCGCCAAG GTTCAGTCGG AGGGCACGGT CAAGACGCTC GCGCAAAAGT ACTTCGGCAA TATCGACGTA TCGGCGAAGT AA
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Protein sequence | MKLVKSLLML SCGFASVAAV SAIAADATSL RYGLEAQYPP FESKGANGEL QGFDIDIGNA VCKTANLKCS WVETSFDGLI PALQGRKFDA INSAMNATEK RRQAIDFTNV IYRVPTQLIA RKDSGLQPTP ESLKGKRVGV LQASIQETYA KAHWESAGVA VVPYQDQNQV YADLVAGRLD ATLVLAPAGQ TGFLSRPDGK DFAFVGEPVR DDKILGSGIA FGIRKGDTAL RNQLNAAIAK VQSEGTVKTL AQKYFGNIDV SAK
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