Gene Bphy_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0016 
Symbol 
ID6241521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp18797 
End bp19588 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content62% 
IMG OID642591778 
Productextracellular solute-binding protein 
Protein accessionYP_001856258 
Protein GI186474788 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.62462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.384726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGG TTAAGAGTCT GCTGATGCTG TCGTGCGGGT TCGCATCGGT GGCGGCCGTG 
TCGGCGATAG CCGCCGACGC GACGTCGCTG CGCTATGGCC TCGAGGCGCA ATATCCGCCG
TTTGAATCGA AGGGTGCGAA TGGCGAGTTG CAGGGCTTCG ATATCGATAT CGGCAACGCC
GTCTGCAAGA CCGCAAATCT GAAATGCAGC TGGGTTGAAA CGTCGTTCGA CGGCCTGATT
CCCGCTTTGC AGGGCCGCAA GTTCGACGCG ATCAACTCGG CGATGAACGC TACGGAAAAG
CGCCGCCAGG CGATTGATTT CACCAACGTG ATCTACCGCG TGCCGACGCA ACTGATCGCG
CGCAAGGACA GCGGACTGCA GCCGACGCCC GAATCTCTGA AGGGCAAGCG CGTCGGCGTG
TTGCAGGCGT CGATTCAGGA GACGTATGCG AAGGCCCACT GGGAAAGCGC GGGCGTCGCT
GTGGTGCCGT ATCAGGACCA GAACCAGGTG TACGCGGATC TCGTCGCCGG CCGCCTCGAT
GCGACGCTCG TGCTCGCGCC GGCTGGGCAG ACGGGTTTCC TGTCACGCCC TGACGGCAAG
GACTTCGCGT TCGTCGGCGA GCCGGTGCGT GACGACAAGA TTCTCGGCAG CGGCATCGCA
TTCGGGATTC GCAAGGGCGA CACGGCGCTG CGCAACCAGC TGAACGCGGC GATCGCCAAG
GTTCAGTCGG AGGGCACGGT CAAGACGCTC GCGCAAAAGT ACTTCGGCAA TATCGACGTA
TCGGCGAAGT AA
 
Protein sequence
MKLVKSLLML SCGFASVAAV SAIAADATSL RYGLEAQYPP FESKGANGEL QGFDIDIGNA 
VCKTANLKCS WVETSFDGLI PALQGRKFDA INSAMNATEK RRQAIDFTNV IYRVPTQLIA
RKDSGLQPTP ESLKGKRVGV LQASIQETYA KAHWESAGVA VVPYQDQNQV YADLVAGRLD
ATLVLAPAGQ TGFLSRPDGK DFAFVGEPVR DDKILGSGIA FGIRKGDTAL RNQLNAAIAK
VQSEGTVKTL AQKYFGNIDV SAK