| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0003 |
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| Symbol | gyrB |
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| ID | 6241509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 3392 |
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| End bp | 5863 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642591766 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_001856246 |
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| Protein GI | 186474776 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.211892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00365115 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGATA CGAACAACTC GCAACCCGAT AACAGCTACG GCGCCTCATC CATTCAGATC
CTCGAAGGTC TGGAGGCCGT GCGCAAGCGG CCGGGTATGT ACATCGGCGA TACGTCGGAC
GGCACCGGTC TGCATCACCT CGTGTTCGAG GTGCTCGACA ATTCGATCGA CGAGGCGCTC
GCCGGTCATT GCGACGACAT TCAGGTCATT ATCCACGCCG ACAACTCGAT CTCCGTGACC
GACAATGGCC GCGGCATTCC GACGGGCATC AAGCGCGACG ACAAGCACGA TCCAAAGCGC
AGCGCCGCTG AGATTGTGAT GACGGAACTG CATGCAGGCG GAAAGTTCGA CCAGAACAGT
TACAAGGTGT CGGGCGGCCT GCACGGTGTG GGTGTGTCGT GTGTGAACGC GCTGTCGTCC
TGGCTGCGCC TTACCGTGCG CCGCGACGGC AAGAAGCACT TCATGGAGTT TCACCGTGGC
GTGGTGCAGA ACCGCGTGAT CGAGCAAGTG GACGGCGAAA GTCTGTCGCC CATTCCCGTT
GTGGGCGAGA CGGAAAATCG CGGCACTGAA GTGCACTTCA TGGCCGACGA GACGATCTTC
GGCAACGTCG AATACCACTA CGACATTCTG GCGAAGCGTA TCCGCGAACT CTCATTCCTG
AACAACGGCG TACGGATTCG TCTCACCGAT CAGCGTTCGG GCAAGGAAGA TGATTTCGCC
TTTGTCGGCG GCGTGAAGGG CTTTGTCGAG TACATCAACA AGACGAAGAG CGTACTGCAT
CCGACCATCT TCCATATTGT CGGCGAGAAG GAGGGCGTGG GCGTCGAAGT CGCGATGCAG
TGGAACGACA GCTACAACGA AAACGTGCTG TGTTTCACGA ACAACATTCC GCAGCGCGAT
GGCGGCACGC ACCTTACCGG TCTGCGCGCG GCGATGACGC GCGTGATCAA CAAGTACATT
GCCGATCACG AAATCGCGAA AAAGGCGAAG GTCGAAACGT CCGGCGACGA CATGCGCGAA
GGGTTGTCGT GCGTGCTGTC GGTGAAGGTG CCGGAGCCGA AGTTCAGCTC GCAGACGAAG
GACAAGCTGG TTTCGTCGGA AGTGCGCGCA CCCGTGGAAG AGGTGGTCGC GAAGGCGCTA
GAAGAATTCC TGCTCGAAAC GCCGAACGAC GCAAAGATCA TTTGCGGCAA GATCGTCGAT
GCCGCGCGCG CGCGCGATGC AGCGCGCAAG GCGCGAGAAA TGACGCGACG CAAGGGCGTG
CTGGATGGCG TCGGTCTACC GGGCAAGCTT GCGGACTGCC AGGAGAAAGA TCCGGCGAAG
TCCGAGATAT ATATCGTCGA GGGTGACTCG GCAGGCGGTT CGGCGAAGCA GGGCCGTGAC
AGAAAATTCC AAGCCATTCT GCCGCTGCGC GGCAAGGTGT TGAACGTCGA GAAGGCGCGC
TACGACAAGC TGCTGTCGTC GGAGCAGATC GTCACGCTGA TCACCGCATT GGGTTGCGGC
ATCGGCAAGG AAGACTACAA CCTCGACAAG CTGCGTTATC ACCGCATCAT CATCATGACC
GACGCTGACG TCGACGGCGC GCACATCCGT ACGCTGCTGC TGACGTTCTT CTATCGTCAG
ATGCCGGAGA TGATCGAGCG CGGCTACATC TACATCGCGC AGCCGCCGCT GTACAAGGTG
AAGGCGGGCA AGGATGAGCG CTATCTTAAG GACACCGCCG AGTTGAACGC GCATATGCTG
CGTCTGGCTC TGAACGGTTC TGAACTGGTC GCCGCCGAAG GTGCGACGCC GATCGCCGGC
GACGCGCTCG GCGAGCTGGC GCGTTCTTAT CTGCTGGCGC AGGCTGTCGT CGATCGTCTG
AGCCGGCTGT ACGACGAGGC GGCGCTCGGG GCGGTGATGG ATGGCGTGTC GATCGATCTG
TCGAGCGAGC AGTCAACGGA AGCATCGGCG CGCGCGCTCG AAGCCAAGCT GCGCGACGAT
CCGCTCAAGC CCGAGATCAA CGTGTTCGCG ATGTACGACC CGGTGCGCGA ACTGCGTTCG
CTGCGGGTGG AGCGTCGCCA TCACGGCAAC GTGAAGGTCT CGGTCATCGA TGAGGAGTTC
CAGCTGACGG CCGACTATCA GCAACTCGTG AACACGGCCA ATACGTTCAA GGGCTTGATC
GGCGAGGGCG CTGTCATCAA GCGCGGCGAG CGCAGCATGG CCGTGGGCGA CTTCAAGAGC
GCGATGAAGT GGCTTATCGC CGATGCGGAA CGCAACGTGT CGAAGCAGCG GTATAAGGGA
CTCGGCGAGA TGAATCCCGA ACAGCTGTGG GAAACGACGA TGGATCCGAA CGTGCGTCGT
TTGCTGCGCG TGCAGATCGA AGACGCGATT GCGGCCGATG GGATCTTTAC GACGCTGATG
GGCGATGAGG TCGAGCCGCG CCGCGCGTTT ATCGAGAGCA ATGCATTGCG GGCAGGGAAT
ATTGACGTTT AA
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| Protein sequence | MTDTNNSQPD NSYGASSIQI LEGLEAVRKR PGMYIGDTSD GTGLHHLVFE VLDNSIDEAL
AGHCDDIQVI IHADNSISVT DNGRGIPTGI KRDDKHDPKR SAAEIVMTEL HAGGKFDQNS
YKVSGGLHGV GVSCVNALSS WLRLTVRRDG KKHFMEFHRG VVQNRVIEQV DGESLSPIPV
VGETENRGTE VHFMADETIF GNVEYHYDIL AKRIRELSFL NNGVRIRLTD QRSGKEDDFA
FVGGVKGFVE YINKTKSVLH PTIFHIVGEK EGVGVEVAMQ WNDSYNENVL CFTNNIPQRD
GGTHLTGLRA AMTRVINKYI ADHEIAKKAK VETSGDDMRE GLSCVLSVKV PEPKFSSQTK
DKLVSSEVRA PVEEVVAKAL EEFLLETPND AKIICGKIVD AARARDAARK AREMTRRKGV
LDGVGLPGKL ADCQEKDPAK SEIYIVEGDS AGGSAKQGRD RKFQAILPLR GKVLNVEKAR
YDKLLSSEQI VTLITALGCG IGKEDYNLDK LRYHRIIIMT DADVDGAHIR TLLLTFFYRQ
MPEMIERGYI YIAQPPLYKV KAGKDERYLK DTAELNAHML RLALNGSELV AAEGATPIAG
DALGELARSY LLAQAVVDRL SRLYDEAALG AVMDGVSIDL SSEQSTEASA RALEAKLRDD
PLKPEINVFA MYDPVRELRS LRVERRHHGN VKVSVIDEEF QLTADYQQLV NTANTFKGLI
GEGAVIKRGE RSMAVGDFKS AMKWLIADAE RNVSKQRYKG LGEMNPEQLW ETTMDPNVRR
LLRVQIEDAI AADGIFTTLM GDEVEPRRAF IESNALRAGN IDV
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