| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3519 |
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| Symbol | |
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| ID | 6199052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 3997923 |
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| End bp | 3998627 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641707474 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001834565 |
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| Protein GI | 182680419 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.477125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.108825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACTT TCGATCTTCA GGCCCGGCTC CTCTACCGGG ACGGCATGAT GCTCGTCCTC
GACAAGCCGG CCGGCATTCC CGTCCACAAA GGCCCGAAAG GTGGCGACAA TCTCGAAGCC
TTCTTTGATG ATCTGCGGTT CGGCCTGCCC CGCCGCCCGG CCCTGGCGCA TCGGCTCGAT
CGCGACACAT CGGGATGCCT GGTGCTCGGC CGTCATCATA AAGCGCTTGA AAAATTGGGT
CTTTTGTTCA AGCAGGGCAA GATCGCCAAA ACCTATTGGA GCGTGGTCCT AGGCGGACCG
ACTGAAGACG AAGGCCTGAT TGATTTGCCG CTCGGGCGGC GTGATGCCGA GCGCGGCTGG
TGGATGAAGG TCGATCCCGA GGGCGCGCCG GCGCAGACCC GTTGGACAGT GCTGGCGCGC
TCCGCGGATC ATTGTCTTCT GGCTTTAAAA CCCTTGACTG GGCGCACGCA TCAATTGCGG
GTGCATTGCG CCGCGCAAGG ATTTCCGATC CTCGGCGATC CGGTCTATGG GCCGGCGGAT
CACAAAGGCG GCGAAACCCT GCATCTCCAT GCCCGCGCCA TCGAGATCCC GCTTTACAAG
AACAAGGAAG CGATCAAGGT CGAGGCCCCT GTGCCAGCGC ATATGCGGCC GGCGCTCATG
GCGCTCGGCT GGCGGGAGGA GACTCAAGAC CGTCCGGAGG TCTGA
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| Protein sequence | MSTFDLQARL LYRDGMMLVL DKPAGIPVHK GPKGGDNLEA FFDDLRFGLP RRPALAHRLD
RDTSGCLVLG RHHKALEKLG LLFKQGKIAK TYWSVVLGGP TEDEGLIDLP LGRRDAERGW
WMKVDPEGAP AQTRWTVLAR SADHCLLALK PLTGRTHQLR VHCAAQGFPI LGDPVYGPAD
HKGGETLHLH ARAIEIPLYK NKEAIKVEAP VPAHMRPALM ALGWREETQD RPEV
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