Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3503 |
Symbol | |
ID | 6201629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 3980503 |
End bp | 3981078 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641707458 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_001834549 |
Protein GI | 182680403 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.637323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.535233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTGA CCGTCGAAAA ACTCGCAATT CCGGATGTCT TGCTGATTCG CCCCAAAAAA TTCGGGGATG CGCGCGGCTA TTTTGCCGAA ACTTATAATG CCCGCGCCTA TTGCGAAGCC GGAATCGATT GCGTCTTTGT GCAAGACAAT CAATCGCTGT CCGTGGAGAA GGGCACGATC CGTGGCCTGC ACTTCCAGGT GCCGCCAGAG CCGCAGGCCA AATTGGTCCG CGTCTTGCGC GGCGCCATTC TCGATGTCGC GGTCGATCTG CGGCGCGGGA GCCCGCATTA CGGTCAATGG TGCGGTGCGA CTTTGACCGC CGAGGAAGGA GAACAGCTCT TCGTCCCACG CGGCTTCGCG CATGGCTTCT GCACGCTCAT GCCCGAGACC GAAGTTGCCT ATAAGGTCGA TGGTTTCTAT GCGCCCGGCT GCGACGCGGG CCTGCGTTAT GATGATCCCG ATATCAATAT CCCCTGGCCG CTCGATGGGA AAGCGGCGAT GATCTCGGAT AAGGACGGCA AGCTCCCCTT CCTGCGTGAT TTCAAGTCTC CCTTCACTTT CGAGGTGCCG GCATGA
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Protein sequence | MALTVEKLAI PDVLLIRPKK FGDARGYFAE TYNARAYCEA GIDCVFVQDN QSLSVEKGTI RGLHFQVPPE PQAKLVRVLR GAILDVAVDL RRGSPHYGQW CGATLTAEEG EQLFVPRGFA HGFCTLMPET EVAYKVDGFY APGCDAGLRY DDPDINIPWP LDGKAAMISD KDGKLPFLRD FKSPFTFEVP A
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