Gene Bind_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_3400 
Symbol 
ID6201718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3861310 
End bp3861828 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content65% 
IMG OID641707347 
Productpeptidoglycan-associated lipoprotein 
Protein accessionYP_001834446 
Protein GI182680300 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.374002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTTC ACCTGAGCGC GAGGGGTCTC AAGCTCGGCG CTGTGCTGGG CGTCGCCCTT 
GCGATGGCTG CCTGCGCCAA GAACCCGGCC GATGATCCGA CGGCCCTGGC GGGCTATGGC
GCCAATGGCG GGCGTGGTGG TGCCGCGTCG CCCGGCAGCC CGCAGGATTT TGCCGTCAAT
GTCGGCGATC GCGTCTTCTT CGAAAGCGAT TCGAGCGAAT TGACGCAGAC CGCCCAGGCC
ACCCTGGATA AGCAGGCGCA CTGGCTGCAG CAATATGGCC GCTATACCTT TACCATCGAG
GGCCATGCCG ACGAACGCGG CACGCGTGAA TATAATTTCG CGCTGGGCGC CCGCCGTGCC
GAGGCGGCCA AGAATTATCT CGTGGCACGA GGCATTGCGA CCTCTCGCCT GCGGACCATC
AGCTATGGCA AGGAACGCCC CGTCGCGACC TGTGACGATA TTTCCTGCTG GTCGCAGAAC
CGCCGCGCGG TCACGGTGCT CGGGGCCGGC CAATCCTGA
 
Protein sequence
MGFHLSARGL KLGAVLGVAL AMAACAKNPA DDPTALAGYG ANGGRGGAAS PGSPQDFAVN 
VGDRVFFESD SSELTQTAQA TLDKQAHWLQ QYGRYTFTIE GHADERGTRE YNFALGARRA
EAAKNYLVAR GIATSRLRTI SYGKERPVAT CDDISCWSQN RRAVTVLGAG QS