Gene Bind_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_3398 
Symbol 
ID6200589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3859718 
End bp3860926 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content63% 
IMG OID641707345 
Productoxygen-independent coproporphyrinogen III oxidase 
Protein accessionYP_001834444 
Protein GI182680298 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.217833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCC CTGTTGGACC CATCCCCTTG GACCCTGTCT CAACGACGAT TAAGGCGAGC 
GCCGGGGAGC CTGCGTTCGG GATCTACCTG CACTGGCCCT TCTGTCTTTC GAAATGTCCC
TATTGCGACT TCAACAGCCA TGTGCGGGCG GAGCCGATCG ACGAGCCGCG CTTCCTCTCA
GGCCTCAAGC GAGAACTCGC GCATCGGGCC TCGCTGACGC CCGGGCGTCA GGTCAGTTCG
ATCTTTTTCG GAGGCGGCAC GCCATCGCTC ATGCAAGGCT CAACAGTCGC GGCGCTGATC
GACGCGATTG CCGGCCATTG GCCGCTCGCG CCGCAGGTCG AGATCACCCT CGAAGCCAAT
CCAACGAGCG TCGAGGCGGA GCGTTTCGCC GCCTATCGCG CGGCGGGTGT CAATCGCGTC
TCTCTCGGTG TCCAGGCCCT TGATGATGCC GCACTCCAGA GCCTTGGCCG TAAACATTCG
GCGGCCGAGG CCTTGCGCGC CGTCAAGACA GCGGCTTCGC TCTTCGAACG CTATTCCTTC
GATCTGATCT ACGGCCGGCC CGGCCAGACG CTCGCGGACT GGAGGCGCGA ACTCGGGGAC
GCCTTGCACT ATGCGCGCGA TCATCTTTCG CTTTACCAAC TCACGATCGA GCCCGAGACG
CCCTTCGCGC AATTAGCGGC TTCTGGTCGC TTCACTTTGC CCGAGGCGGA TCTTGGCCGC
GACTTATGGG ATCTGACCCA GGAGGTCATG AACAAAGCGG GCCTGCCCGC CTATGAGGTT
TCAAACCACG CGCGGCCTGG TGCGGAGAGC CGGCATAATC TTCTCTATTG GCGCTATGGC
GAATATGCCG GTGTCGGACC CGGCGCGCAT GGCCGGCTGC TGACGCCGCA TGGCCGGCGC
GCGCAAGCCA CCCTGCGGCA GCCAGACCTG TGGCTCAAGA CCGTGGAGGA ACGGGGTGAA
GGCTTGACCG AGGACATGCC TTTGACGCGC GAGGAACAGG CCGACGAATT TTTGCTGATG
GGCCTCAGAC TGACCGAAGG CATTGCGCCG GAAAATTTCC GCGCTGTTGC CGGACGTGAC
TTCGATCCAC GCCGGCTCCA AACGCTTCTA TCCGAGGGCA TGCTGGAATA TACGCCGCAT
GGCCGTGTGC GCGTGAGCGC GGAAGGTTTT CCCGTGCTCG ACGCCGTGAT CGCCGATCTC
GCCGCCTGA
 
Protein sequence
MESPVGPIPL DPVSTTIKAS AGEPAFGIYL HWPFCLSKCP YCDFNSHVRA EPIDEPRFLS 
GLKRELAHRA SLTPGRQVSS IFFGGGTPSL MQGSTVAALI DAIAGHWPLA PQVEITLEAN
PTSVEAERFA AYRAAGVNRV SLGVQALDDA ALQSLGRKHS AAEALRAVKT AASLFERYSF
DLIYGRPGQT LADWRRELGD ALHYARDHLS LYQLTIEPET PFAQLAASGR FTLPEADLGR
DLWDLTQEVM NKAGLPAYEV SNHARPGAES RHNLLYWRYG EYAGVGPGAH GRLLTPHGRR
AQATLRQPDL WLKTVEERGE GLTEDMPLTR EEQADEFLLM GLRLTEGIAP ENFRAVAGRD
FDPRRLQTLL SEGMLEYTPH GRVRVSAEGF PVLDAVIADL AA