| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3389 |
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| Symbol | |
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| ID | 6201319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 3846864 |
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| End bp | 3848552 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641707336 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001834435 |
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| Protein GI | 182680289 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.887563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.228354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTATA CGGTTGGCAG CTATTTGGGC GAGCGTCTGG CGCAGATCGG CTTGAAACAT
CATTTCGCGG TAGCCGGTGA TTATAATCTC GTCCTCCTCG ATCAGTTGCT GACGGTGAAG
GGCACGGAAC AGGTCTATTG CTGCAACGAG CTCAATTGCG GCTTTAGCGC CGAAGGCTAT
GCCCGTGCCA ATGGCGCTTC CGCCGCCGTA GTGACCTTCA GCGTCGGCGC GATCTCCGCC
TTCAATGCAG TCGGCAGCGC CTATGCCGAA AATCTGCCGC TCATCCTGAT TTCCGGCGCG
CCGAACTCAA ATGATCATGG CAGTGGTCAC GTCCTGCATC ATACAATCGG CACAACCGAC
TACACTTATC AATTGGAACT CGCCAAGAAA ATCACTTGTG CTGCGGTCTC GATCATTTCT
CCCGATCACG CGCCGACGCT GATCGATCAT GCGATCCGCA CGGCCTTACG CGAAAAGAAA
CCGGCCTATA TCGAGATTGC CTGCAATGTC TCGGGCCTTC CCTGCGCCGC TCCCGGCCCC
GTGAGTGCGC TCCTGCCGAC GACACCGAGT GATAGCGCGA CTGTCAACGC GGCTGTCGAG
GCCGCGGTCG AATTTCTGTC GAAGCGGGAA AAGATCGTTT TGCTGATTGG CAGCAAGCTG
CGCGCAGCCG GCGCCGAGGC GGAAGCCATC AAGCTCGCCG ACGCGTTGGA GTGTGCTGTC
GCCACGATGG CCGCCGCCAA AAGCTTCTTT CCCGAAGATC ATCCGCATTA TATCGGTACT
TATTGGGGTG AGGTCAGCAG CGCCGGCGTC AAGGAAATCG TCGATTGGGC GGATGGTATT
TTATGCCTTG GACCCGTCTT CAATGATTAT TCCACGGTTG GCTGGACCGC CTGGCCGAAG
GGACCGAATG TCCTCGTCGC GGACAAAGAC GAAATCACAC TCACGGACCA TGCTTTCAAC
GGCATCACCT TGAAGGAATT TCTCGCCACC CTCACCGAAC GCCTGAAGGG CGTGAAGAAG
AATGCGACCA TGGTGGAATT TCACCGCGTC GTGCGTCCGG TTGCGCCGAC CATTGCGGCC
GATCCGAAAG CGAAATTGAT GCGGGCTGAA ATGGCGCGCC AGATCGAGAC CGTGCTCACC
GAAAATACGA CGCTTGTGGT GGAAACCGGG GATTCCTGGT TCAACGCCAT GCGCATGAAA
CTGCCGCATG GCGCCCGCGT CGAATTCGGG ATGCAATGGG GCCATATCGG CTGGTCGATT
CCCGCGACCT TCGGTTATGC CGTGGCCGAA CCGGACCGCC GCATCGTCAC CATGGTCGGT
GACGGCTCCT TCCAATTGAC CGCGCAGGAA GTCGCGCAAA TGGTCCGTCG CAATTTGCCG
GTGATCATTT TCCTCATCAA CAATCACGGA TACACGATCG AGGTCGAGAT CCACGACGGA
CCCTATAACA ATATCAAGAA TTGGGACTAT GCCGGCATTA TCGAGGTCTT CAACGCCGAC
GAAGGCAAGG GCAAGGGCTT CCGCGCGACC AATGGTGGCG AACTCGCCGA TGCCATCAAG
GCAGCTCTCG CCAATAAAGC CGGACCGACC CTGATCGAAT GCGTGATCGA TCGCGACGAT
TGCACCAGCG AATTGATTTC CTGGGGCCGT CGGGTGGCGA CGGCCAATGC GCGCCCGCCG
GCAAAATAG
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| Protein sequence | MTYTVGSYLG ERLAQIGLKH HFAVAGDYNL VLLDQLLTVK GTEQVYCCNE LNCGFSAEGY
ARANGASAAV VTFSVGAISA FNAVGSAYAE NLPLILISGA PNSNDHGSGH VLHHTIGTTD
YTYQLELAKK ITCAAVSIIS PDHAPTLIDH AIRTALREKK PAYIEIACNV SGLPCAAPGP
VSALLPTTPS DSATVNAAVE AAVEFLSKRE KIVLLIGSKL RAAGAEAEAI KLADALECAV
ATMAAAKSFF PEDHPHYIGT YWGEVSSAGV KEIVDWADGI LCLGPVFNDY STVGWTAWPK
GPNVLVADKD EITLTDHAFN GITLKEFLAT LTERLKGVKK NATMVEFHRV VRPVAPTIAA
DPKAKLMRAE MARQIETVLT ENTTLVVETG DSWFNAMRMK LPHGARVEFG MQWGHIGWSI
PATFGYAVAE PDRRIVTMVG DGSFQLTAQE VAQMVRRNLP VIIFLINNHG YTIEVEIHDG
PYNNIKNWDY AGIIEVFNAD EGKGKGFRAT NGGELADAIK AALANKAGPT LIECVIDRDD
CTSELISWGR RVATANARPP AK
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