| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3092 |
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| Symbol | |
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| ID | 6200155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 3533943 |
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| End bp | 3537113 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641707040 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001834142 |
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| Protein GI | 182679996 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.185291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0905875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCCT CGATCTTCAT CGATAGGCCA CGCCTTGCCA TCGTCATCGC CATTGTGATC
ACCATCGCCG GCGCGATTTC GATGACCCGG ATTCCGGTAT CACAATTCCC CGATATCGTG
CCGCCGCAAG TGCAGGTCAC GGCGCGTTAT CCGGGTGCCT CGGCCGGCGT CGTCGAAGCC
TCCGTCGCGC AGCCGCTCGA GGCACAGATC GTCGGCGTCG ACAAAATGCT CTATATGAAA
TCAGCGAGCG GCGACGATGG CAGTTATACG CTGACCGCGA CCTTCGATCT GTCGAGCAAT
CCCGACATCG ATACGGTCAA TGTCAATAAT CGCGTGCAGA CGGCCACGCC GCTCCTGCCG
CCGGAGGTGC GCCAGCAGGG CCTGACGGTG CAGAAACGCT CGTCGGCGGT TTTGCAATTC
ATGATGCTCT ACAGCGACAA TGGCGCGCAG GACCCGCTGT TCATCACCAA TTACGCGACG
ATCAACGTGC TCGATGAAAT TTCGCGCACA CCCGGCGTCG GCCAGGCGAG CCTCTTCGGC
AATCTCAAAT ATTCGATGCG GATCTGGTTC GATACGAGCC GGCTTGTCAG CCTCAATCTG
GCCCCTTCCG ATGTGATCGC CGCGATCAGT AATCAGAATG TCCAGGCGCC GATCGGACGT
ATCGGCGCGA GACCCATTGC CGACGATCAG CAATTCCAGT TCAATCTGCA GACACTGGGG
AGGCTGCAGA CACCGGAGGA ATTCGGTGCA ATCGTGATCC GCGCCAATCC CGATGGATCG
GTGCTGCGCG TGCGCGATGT CGCGCGGGTG GAAATGGGCG CCCAGAGCGA GGATGCCGAG
GGCCGCTATT CCGGCAAGCC GGCGGTCGGC ATCGGCATTT ATCTGTCTCC CGGTGCCAAT
GCCGTGCAAA CCGCGGCCGC CGTGGGCAAG GTCCTGGAAC GGGTCGGCAA ACGCTTTCCC
GAGGGGTTGA AATCCACCGT CGTCTATGAT GCGACGACCT TCGTGTCGGA TACGGTACGC
GAGGTCTTGC ACACCTTGAT CGAAGCTTTC GTCCTCGTCG TCCTCGTCGT CTTTCTGTTT
CTCGGCAGTG TCCGCGCGAC GGTCATTCCA ACGATCGCCA TTCCGGTCAG CCTCATCGGA
ACATTCGCCA TCCTCCTCGC ACTCGGCTTT TCAGCCAATA CGGTCTCGCT GCTCGCTTTG
GTTCTGGCCA TCGGCATAGT CGTCGACGAT GCGATCGTGG TTGTCGAGAA TGTCGAGCGC
GTGATGGAGG AGGAGCCGGA TCTGACACCG GCCGAGGCCA CCAAAAAAGC CATGGCGCAG
ATCACCGCGC CGATCATCGC CATCACCTTG GTCCTGCTCT CGGTCTTCGT TCCGATTGCC
TTCATTCCTG GCACGTCGGG CGTCTTATTC CGTCAATTCG CGGTGACGAT CAGCGCCGCC
ATGCTGATCT CGGCGCTCAA TGCCTTGACC CTTTCGCCCG CGCTTTGCGC CATCGTTTTG
AAACGGGGCC GGCCGCGGCG CGGCCTCATG CATCTCGTGC TGCAGGGCAT CGACAAGGTC
CGCGACGGCT ATGCCCGCGT CGTCGTCAGG CTCCTGCGCT TTTCCTTCCT CGCCGTATTG
CTTGTCCTCG TCTTCGGCGC GGGCATTTAT GGCCTGTCCT TCAAGACGCC GACCGGCTTC
CTGCCCGAGG AAGATCAGGG CGCCTTCTTC ATCGCGATCC AATTGCCCGA TGGCGCCTCG
GTGGCACGCA CCAGCGAGGT CATCAAGCGG GTCGAGAAAA TTCTGCTCGG CATGCCGCAG
GTCAAGGCGA CTTTCGCCAT TACCGGCTTT TCCCTCATCG ATGGCGCCAA CGAAGCCAAT
AATGGGTTCA TGGTCGCCAA TCTGAAGCCT TTCGAGGATC GCAAGGCCGC CATGGACTCG
GCGCAGGCCT TGATCGCCCA GGTGTTCATG CGCGCCGCCA CCGAAATCCG GACGGCCCGC
GTCATCGCCT TCAACCTGCC GCCGATCATC GGCCTTTCGA CCAGCGGCGG CTTCGAATTC
ATGCTCGAAG GGCTTGAAGG CCAGGAACCC GCCCAGCTCT CGAGCGTCAT GCAGAGCCTG
ATCATCGGCG CCAATCAAAG GCCCGAGCTC ACGCGCGTCT TTTCGACCTT TACCGCGACC
AATCCATCGA TCTTCCTCGA AATCGATCGC GACAAGGCGC AGGCGCTCGG CATCAATATT
GCCGATCTGT TCAATGCCCT GAACACGACG TTAGGGGGCT ATTACATCAA CGACTTCAAT
CTTTATGGCC GAACCTGGCA GGTCAATATC CAGGGCGAGG CCGCCGACCG GCGCGATATT
TCCTCAATCT GGCAGATCTA TATCCGCAAC AATAGGAATA CGATGGTGCC CATGGCCTCG
CTCGCCACGG TGCGCATGGT CCAAGGGCCA CAGATCATCA CGCGCTATAA TAATTACCGC
GCCATTCTCA TTAACGGATC GCCCGCGGCA GGCGTTTCCT CGGGCTCGGC CTTGGAGGCC
ATGGGCACGC TGGCCGATCA GACGCTGCCC CCCGGCTTTT CCTTCGAATG GACCGGCACG
GCCTATCAGG AATCACAGGT CTCCGGCCAG ACGGGCTTCA TCCTCGCCTT CGCCTTGCTG
TTTGCCTATC TCTTTCTCGT TGGTCTCTAT GAGAGCTGGG TCATTCCAGT GCCGGTCCTG
CTCTCTGTCT CCGTCGCGGT GTTCGGTGCC TTTCTCGGCA TTATCGTGGC TGGCGTATCG
CTCGACCTTT ATGCTCAGAT CGGCCTCGTG GTGCTGATCG CGCTCGCCGC GAAAAATGGT
ATTCTGATCG TGGAATTTGC AAAGGAACAA CGCGAGCACG GAGCCACGAT CATCGAAGCA
GCGGCCCTTG GCGCGGAAAT GCGGTTCCGG GCCGTCATGA TGACATCGCT CGCCTTCCTG
CTCGGCCTCA TTCCGCTGAT TCGGGCGACC GGTGCCGCGC AATTGAGCCG CCGCGCGGTT
GGCACGCCCG TCTTTGCCGG CATGCTGGCG GCCAGCACTA TCGGCGTCTT TCTCATCCCC
ATGCTGTATG TGGTTTTCCA GAAAATGGTC GAACGCGTCA GCAGTGCAAA GCCGAAGACA
CAAAAGGTAC TCGCGCAAAC AGGCGAGCCG CCTGCCCCTC GTTCGGCCTG A
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| Protein sequence | MFSSIFIDRP RLAIVIAIVI TIAGAISMTR IPVSQFPDIV PPQVQVTARY PGASAGVVEA
SVAQPLEAQI VGVDKMLYMK SASGDDGSYT LTATFDLSSN PDIDTVNVNN RVQTATPLLP
PEVRQQGLTV QKRSSAVLQF MMLYSDNGAQ DPLFITNYAT INVLDEISRT PGVGQASLFG
NLKYSMRIWF DTSRLVSLNL APSDVIAAIS NQNVQAPIGR IGARPIADDQ QFQFNLQTLG
RLQTPEEFGA IVIRANPDGS VLRVRDVARV EMGAQSEDAE GRYSGKPAVG IGIYLSPGAN
AVQTAAAVGK VLERVGKRFP EGLKSTVVYD ATTFVSDTVR EVLHTLIEAF VLVVLVVFLF
LGSVRATVIP TIAIPVSLIG TFAILLALGF SANTVSLLAL VLAIGIVVDD AIVVVENVER
VMEEEPDLTP AEATKKAMAQ ITAPIIAITL VLLSVFVPIA FIPGTSGVLF RQFAVTISAA
MLISALNALT LSPALCAIVL KRGRPRRGLM HLVLQGIDKV RDGYARVVVR LLRFSFLAVL
LVLVFGAGIY GLSFKTPTGF LPEEDQGAFF IAIQLPDGAS VARTSEVIKR VEKILLGMPQ
VKATFAITGF SLIDGANEAN NGFMVANLKP FEDRKAAMDS AQALIAQVFM RAATEIRTAR
VIAFNLPPII GLSTSGGFEF MLEGLEGQEP AQLSSVMQSL IIGANQRPEL TRVFSTFTAT
NPSIFLEIDR DKAQALGINI ADLFNALNTT LGGYYINDFN LYGRTWQVNI QGEAADRRDI
SSIWQIYIRN NRNTMVPMAS LATVRMVQGP QIITRYNNYR AILINGSPAA GVSSGSALEA
MGTLADQTLP PGFSFEWTGT AYQESQVSGQ TGFILAFALL FAYLFLVGLY ESWVIPVPVL
LSVSVAVFGA FLGIIVAGVS LDLYAQIGLV VLIALAAKNG ILIVEFAKEQ REHGATIIEA
AALGAEMRFR AVMMTSLAFL LGLIPLIRAT GAAQLSRRAV GTPVFAGMLA ASTIGVFLIP
MLYVVFQKMV ERVSSAKPKT QKVLAQTGEP PAPRSA
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