Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3060 |
Symbol | |
ID | 6198178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 3491600 |
End bp | 3493372 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641707008 |
Product | polypeptide-transport-associated domain-containing protein |
Protein accession | YP_001834111 |
Protein GI | 182679965 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTTT CTCTCGGCCG TTTCCATGGC CAGTCCGCTT TTGCCGCATC GCTGCTGAAC TGCGCCGCTG TTCTTCCCGC TTTCTCTCCG GCTCTGGCGC AGACGGCAGG GCAGCCAAGC CCAGCGCGGG TGCTGGTGGA ATTGCCTTAC AATATCGGTG ATGCGGTGCG GCAGGCCAAT GCGGCGTACC AGCCACCGCT CGCCCAACTC CCCGCGGTGC CAGTGCTGCC GCAGCTCGTC GAGCCACAAC TCACGCTGCC CAGCAACGAG AAGCTGATGA TCCGGCACAT CGAGGTCGAC GGGGCGGACG CGGCGAGCCA GGAGGAAGTC CGAGCGCTGC TGGCCCCCTA CGAGGGGCGG TGGCTGACCT TGAGTGAGAT CTATGAGGCA GCCGACAAGA TCACCACGCT CTACCGCGAG CGCGGCTTCC TCGTCGCCAA AGCCTATGTG CCGGCCCAGG ACGCCCGCAA AGGCACCTTG CGCATCAAGC TGGTGGCCGG CCGTTTCGGC CAGGTGAGCG TGAAGGATGA GTCGCTGGTG CGCGAGGATT TCCTGAAGGA TGTCATCGAC ACGGCTCTTG CGGATGATCC GCAGATCCAT AAGGCCGCGC TGGAACGGGC CATGCTGCTC GTCTCCGATC TTCCGGGCGC CGGCATGCCG CGCGTCGCCA TCGCACCGGG CCAGCAGCCG GAGACGTCCG ACTTCGTATT TTCGGTGCCG CAGGGCAAGA GTGTCGACGG TTACCTTCTC GGCGACAATG GCGGCTCGCG CTATACCGGC CGCGACCGGC TGAGCGGCGG ACTCAACATC AATTCGCCGC TCGGCTTCGG CGATCGCCTG TCGCTCTTCG GTGTCATCTC GCAAACGAAG GGCCTGCTCA ACGGGCGCGC GGCCTATTCC TTTCCCATCG GTTATGACGG GCTGCGCGGC GAGATCGGCG CCTACAAGAC CACCTATGTG CTGGGTGGTA TCTATAGCGG GCTCGATGCG ACGGGCGACG CCAGCGCCAT TTATGCCACG CTCAATTATG CGATCCTGCG CTCGCGCGAG GAGAGCCTCT ATGTGTCGGG CATCTTCACC CACAAGAGCC TCGACGACAG AGTGTTCGGC ATCTCGACGG CGAGCCGGGA GATCAATCTC GGCACTATCA ATCTCACCAA CGATACATTT GGTGTGATCA ACGGCATGCC TTTGTCGACC AGCGTATCGC TGTCCTATAC GGCGGGCTAT GTCAATTTCG CCGATCCGGA GCAGCTGCTT GCCAACGAGC AGACGATCCG CACGGCCGGT CATTACGACC GTCTGAACCT TTATGCGAAC GCCAATCTCG GGCTTTCGGA GAATTTATCG TTCCTCATGC TGCTCCGCGG CCAGAAGGCC CTGAGCGGTA GCCTCGACAC CAGCGAACAG ATGACGCTCT CAGGCTTTTG GGGTGTGCGC TCCTACGATG AAGGCCTTTC CGCCGATAGC GGCTATCTGG TGATGCCGGA ATTCCGTCTC GCTCTGCCGG CGCTGCCGCA ATATCAGCAT TCTCTTGGCT TTTTCACCGA TGTGGCGGGC GGCTGGCTGG AGAATGCCAC CTATTCGACG GTGCAGCGGC GTTTCACCCA GATCAATGAC ATTGGGCTTG GCTATTACAT GACCTATGAA TATATGCCGG GCCGGTTTCT GACTGGCAAG GGTCTGCTGG CGCATACCTA TGGTTCGAAC GGCGGCCTCA CCAGCTACGA CCGCGAGACC AAGGGGCTCG TCCAGATCGG CATTACTTTC TAA
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Protein sequence | MRLSLGRFHG QSAFAASLLN CAAVLPAFSP ALAQTAGQPS PARVLVELPY NIGDAVRQAN AAYQPPLAQL PAVPVLPQLV EPQLTLPSNE KLMIRHIEVD GADAASQEEV RALLAPYEGR WLTLSEIYEA ADKITTLYRE RGFLVAKAYV PAQDARKGTL RIKLVAGRFG QVSVKDESLV REDFLKDVID TALADDPQIH KAALERAMLL VSDLPGAGMP RVAIAPGQQP ETSDFVFSVP QGKSVDGYLL GDNGGSRYTG RDRLSGGLNI NSPLGFGDRL SLFGVISQTK GLLNGRAAYS FPIGYDGLRG EIGAYKTTYV LGGIYSGLDA TGDASAIYAT LNYAILRSRE ESLYVSGIFT HKSLDDRVFG ISTASREINL GTINLTNDTF GVINGMPLST SVSLSYTAGY VNFADPEQLL ANEQTIRTAG HYDRLNLYAN ANLGLSENLS FLMLLRGQKA LSGSLDTSEQ MTLSGFWGVR SYDEGLSADS GYLVMPEFRL ALPALPQYQH SLGFFTDVAG GWLENATYST VQRRFTQIND IGLGYYMTYE YMPGRFLTGK GLLAHTYGSN GGLTSYDRET KGLVQIGITF
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