| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2975 |
|---|
| Symbol | |
|---|
| ID | 6198135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 3383498 |
|---|
| End bp | 3384394 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641706921 |
|---|
| Product | phytanoyl-CoA dioxygenase |
|---|
| Protein accession | YP_001834030 |
|---|
| Protein GI | 182679884 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.988163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.298504 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATATG ATGATCTTGC AATAAATTCA CTCGTCGATA CTGCTTATGA AAATATGATG
TCCGTAGGCT ACACTATTTT ACCTAAACTG ATCCAAACAG AAGTCATTTC ACAGTTGAAC
GAGACGTTTG ATCCAATCTT CGAAACAACG CCTTTCTGTG TTGGTGGTTT CTATGGTGAA
CGAACAAAAC GCTTCGGGAG CCTTCTTCGC CGTTCAATAA CCACTGCCGA CCTAATCCAG
CATCCTGTTA TAATAGGACT TGCACAGAAA ATACTTGGCC AGTGGTGTGA CAACATTCAG
CTTAATCTTG GACAAGCGAT CGAGATTCAC TCAGGCGCTT TGCAACAATT TCCGCATCGC
GATCAGGATA TGTGGAGAAC AACACCAGGG CAGGAATATC TCATCAACGT GATGTGGCCT
CTGTCGCCAT TCCATGCAGC CAATGGCGCT ACCCTGATCT GGCCTCACTC TCATGGAAAA
TATGCAGCAG AAGGGGCCAC CCTTTGCGAA CCCATCGTTG CTGAATGCAA TCCGACAGAT
GCCATTGTCT TTTTGGGGTC GACGCTTCAT GGTGGCGGAT CTAATATCAC AGCAAGCCCC
CGTCGAGGCA TCATCATCAG CTATTGTCTC GGTTGGTTAA AACCGTACGA GAACCAATGG
CTGGTCTATC CCCCAGAAAT CGCAAGAAAC TTCCCTCATC AATTGGCGCA ACTTGTTGGC
TATCGTCAAC ATCGTCCCAA TCTAGGAAAT GTTGAAGGTC GCTGCCCGTC CACTCTCCTA
TGGCAACAGG AGAACGATAA TCTTGCCGCC ACAGATGCCC TTCGACCCGA TCAGGAAATG
GCTGTAGCCG ATTTTATCTC CAGTCAACAT GCGGCCGAAA AGCATAGTAT AGCCTAG
|
|---|
| Protein sequence | MRYDDLAINS LVDTAYENMM SVGYTILPKL IQTEVISQLN ETFDPIFETT PFCVGGFYGE
RTKRFGSLLR RSITTADLIQ HPVIIGLAQK ILGQWCDNIQ LNLGQAIEIH SGALQQFPHR
DQDMWRTTPG QEYLINVMWP LSPFHAANGA TLIWPHSHGK YAAEGATLCE PIVAECNPTD
AIVFLGSTLH GGGSNITASP RRGIIISYCL GWLKPYENQW LVYPPEIARN FPHQLAQLVG
YRQHRPNLGN VEGRCPSTLL WQQENDNLAA TDALRPDQEM AVADFISSQH AAEKHSIA
|
|---|
| |