| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2860 |
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| Symbol | |
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| ID | 6200526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 3263483 |
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| End bp | 3264847 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641706807 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_001833918 |
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| Protein GI | 182679772 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00385913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGG CGTTAACACA CTTGAAACAG AGGGCCACGA GAATCGCGGG GATTTTGGCC
TTGGGTTTGG GACTGACGCA GGGCGGGACG GCAGCACGGG CCGCGGATGT CGCGCCGCCA
GCCCAAGTGG CGGTGTCGCC CGCGCCTCCC GTCCCGGAAC ATGACTGGGC CTTGGGGACT
TGGGGCGGGG TGCGCTCCGA TCTTTATCGC AAGGGTATCG ATTTCCAATT CGTCTGGGTC
AGCGAAGTCG CCTATAACAT GACCGGCGGC GCGGAAAACC GCATCGCCCA GGCCGGCCAG
TTGAACCTTG GCGTCACCTT CGATCTGGAA AAATTATTCG GCGATCCGGG TGCCATCTTC
CAGATGACCT TCGATAAGCG CGAGGGCCGC AATCTCAATC ATGATGCCGG CCTCGACATG
CTGGTCCAGC CGCAGGAAGT CTATGGCCGC GGTGACATCT GGCGCCTGAC GCAATTCTGG
TACGATCAGA AATTCGCCAA TGGCGTGATC GATTGGAAAA TCGGCAAGAT GGCGGTGAGT
GAAGACATCA CCCAATATCC TTGCGTGTTC ATGAACCTGT CGTTCTGCGG CTCGGCGCCG
GGCCGCGGCC TCGCCGGCAA TTATTTCTTC AATTATCCGA TCGGCCAATG GGGCACGCGG
GTGCGCTTCA ACGCGCCGGA AGCCTATTTC ACCCTGGCGG CCTATCAGAT GAACCCCAAC
GTCTTGAAAC AAAGCTATGG GGTGAATTTC GATTTCAGCG GCGGCAACGG GGTCCTGCTG
CCGATCGAAT TCGGCTGGCT GCCGGCTTTT GATGGAGGCC GTCTGCCCGG TGTCTACCAA
TTCACCGCCT GGTATGGCTC GCAGCAGGCT CAAAACGTCG TGGCCCTCAA TTACCCGAAT
CTCGTGCCGC TCAGCGATCT GCCGGTGGGT GGCCGCTGGG GCGTGAGCTT TCAGATGTCG
CAGCAGCTCA CGCATCCTTC CGATGATCAT CCCAAACAGG GCCTGAGCCT GATCGGCAGC
ATGGTGATGC TTGATCGGGC GACCTCGACG CTCAACAACC AGGAGACCAT CGGCCTCGTC
TATCACGGAC CGTTCGAGAA CCGTCAGGGC GATGAAATCG CCATTGCCTG GGGCCGCACG
GAGGTCAATT CGCGCCTGAC CAATGCCGCG ATCCTGTCCA ATGTCCTCGT GCCTGGCTCG
GCCGTCGTGC GACGCGCCGA ATATCCCTTG GAAATCTACT ACAACTTCCA TGCCTATAAC
GGCATTGATG TGCGTCCGAA CTTCCAATGG ATTCACTGCC CAGGCGGTAT TTGTAACAAA
CCGGATGTGG CCATCCTCGG CGTGAAAACT GTCATTAATT TCTAA
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| Protein sequence | MSMALTHLKQ RATRIAGILA LGLGLTQGGT AARAADVAPP AQVAVSPAPP VPEHDWALGT
WGGVRSDLYR KGIDFQFVWV SEVAYNMTGG AENRIAQAGQ LNLGVTFDLE KLFGDPGAIF
QMTFDKREGR NLNHDAGLDM LVQPQEVYGR GDIWRLTQFW YDQKFANGVI DWKIGKMAVS
EDITQYPCVF MNLSFCGSAP GRGLAGNYFF NYPIGQWGTR VRFNAPEAYF TLAAYQMNPN
VLKQSYGVNF DFSGGNGVLL PIEFGWLPAF DGGRLPGVYQ FTAWYGSQQA QNVVALNYPN
LVPLSDLPVG GRWGVSFQMS QQLTHPSDDH PKQGLSLIGS MVMLDRATST LNNQETIGLV
YHGPFENRQG DEIAIAWGRT EVNSRLTNAA ILSNVLVPGS AVVRRAEYPL EIYYNFHAYN
GIDVRPNFQW IHCPGGICNK PDVAILGVKT VINF
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