Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2838 |
Symbol | |
ID | 6199434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 3234773 |
End bp | 3236140 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641706785 |
Product | carbohydrate-selective porin OprB |
Protein accession | YP_001833896 |
Protein GI | 182679750 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3659] Carbohydrate-selective porin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.258028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCGA AAAAAGCAGG GCGGCAGCTT CTGCGGGCCA CGAGAATCGC GGGGATTTTG GCCTTGGGTT TTGGACTGAC GCAGGGCGGG ACGGCAGCAC GGGCCGCGGA TGTCGCGCCG CCAGCCCAAG TGGCGGTGTC GCCCGCGCCT CCCGTCCCGG AACATGACTG GGCCTTGGGG ACTTGGGGCG GGGTGCGCTC CGATCTTTAT CGCAAGGGTA TCGATTTCCA ATTCGTCTGG GTTAGCGAAG TCGCCTATAA CATGACCGGC GGCGCGGAAA ACCGCATCGC CCAGGCCGGC CAGTTGAACC TCGGCGTCAC CTTCGATCTG GAAAAATTAT TCGGCGATCC GGGTGCCATC TTCCAGATGA CCTTCGATAA GCGCGAGGGC CGCAATCTCA ATCATGATGC CGGCCTCGAC ATGCTGGTCC AGCCGCAGGA AGTCTATGGC CGCGGTGACA TCTGGCGCCT GACGCAATTC TGGTACGATC AGAAATTCGC CAATGGCGTG ATCGATTGGA AAATCGGCAA GATGGCGGTG AGTGAAGACA TCACCCAATA TCCTTGCGTG TTCATGAACC TGTCGTTCTG CGGCTCGGCG CCGGGCCGCG GCCTCGCCGG CAATTATTTC TTCAATTATC CGATCGGCCA ATGGGGCACG CGGGTGCGCT TCAACGCGCC GGAAGCCTAT TTCACCCTGG CGGCCTATCA GATGAACCCC AACGTCTTGA AACAAAGCTA TGGGGTGAAT TTCGATTTCA GCGGCGGCAA CGGGGTCCTG CTGCCGATCG AATTCGGCTG GCTGCCGGCT TTTGATGGAG GCCGTCTGCC CGGTGTCTAC CAATTCACCG CCTGGTATGG CTCGCAGCAG GCTCAGGACG TCGTGGCCCT CAATTATCCG AATCTCGTGC CGCTCAGCGA TCTGCCGGTG GGTGGCCGCT GGGGCGTGAG CTTCCAGATG TCGCAGCAGC TCACGCATCC TTCCGATGAT CATCCCAAAC AGGGCCTGAG CCTGATCGGC AGCATGGTGA TGCTTGATCG GGCGACCTCG ACGCTCAACA ACCAAGAGAC CATCGGCCTC GTCTATCACG GACCGTTCGA GAACCGTCAG GGCGATGAAA TCGCCATTGC CTGGGGCCGC ACGGAGGTCA ATTCGCGCCT GACCAATGCC GCGATCCTGT CCAATGTCCT CGTGCCTGGC TCAGCCGTCG TGCGACGCGC CGAATATCCC TTGGAAATCT ACTACAACTT CCATGCCTAT AACGGCATCG ATGTGCGTCC GAACTTCCAA TGGATTCACT GCCCAGGTGG TGTTTGTAAC AAACCGGATG TGGCCATCCT CGGTGTGAAA ACTGTCATTA ATTTCTGA
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Protein sequence | MASKKAGRQL LRATRIAGIL ALGFGLTQGG TAARAADVAP PAQVAVSPAP PVPEHDWALG TWGGVRSDLY RKGIDFQFVW VSEVAYNMTG GAENRIAQAG QLNLGVTFDL EKLFGDPGAI FQMTFDKREG RNLNHDAGLD MLVQPQEVYG RGDIWRLTQF WYDQKFANGV IDWKIGKMAV SEDITQYPCV FMNLSFCGSA PGRGLAGNYF FNYPIGQWGT RVRFNAPEAY FTLAAYQMNP NVLKQSYGVN FDFSGGNGVL LPIEFGWLPA FDGGRLPGVY QFTAWYGSQQ AQDVVALNYP NLVPLSDLPV GGRWGVSFQM SQQLTHPSDD HPKQGLSLIG SMVMLDRATS TLNNQETIGL VYHGPFENRQ GDEIAIAWGR TEVNSRLTNA AILSNVLVPG SAVVRRAEYP LEIYYNFHAY NGIDVRPNFQ WIHCPGGVCN KPDVAILGVK TVINF
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