Gene Bind_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_2838 
Symbol 
ID6199434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3234773 
End bp3236140 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content59% 
IMG OID641706785 
Productcarbohydrate-selective porin OprB 
Protein accessionYP_001833896 
Protein GI182679750 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3659] Carbohydrate-selective porin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.258028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGA AAAAAGCAGG GCGGCAGCTT CTGCGGGCCA CGAGAATCGC GGGGATTTTG 
GCCTTGGGTT TTGGACTGAC GCAGGGCGGG ACGGCAGCAC GGGCCGCGGA TGTCGCGCCG
CCAGCCCAAG TGGCGGTGTC GCCCGCGCCT CCCGTCCCGG AACATGACTG GGCCTTGGGG
ACTTGGGGCG GGGTGCGCTC CGATCTTTAT CGCAAGGGTA TCGATTTCCA ATTCGTCTGG
GTTAGCGAAG TCGCCTATAA CATGACCGGC GGCGCGGAAA ACCGCATCGC CCAGGCCGGC
CAGTTGAACC TCGGCGTCAC CTTCGATCTG GAAAAATTAT TCGGCGATCC GGGTGCCATC
TTCCAGATGA CCTTCGATAA GCGCGAGGGC CGCAATCTCA ATCATGATGC CGGCCTCGAC
ATGCTGGTCC AGCCGCAGGA AGTCTATGGC CGCGGTGACA TCTGGCGCCT GACGCAATTC
TGGTACGATC AGAAATTCGC CAATGGCGTG ATCGATTGGA AAATCGGCAA GATGGCGGTG
AGTGAAGACA TCACCCAATA TCCTTGCGTG TTCATGAACC TGTCGTTCTG CGGCTCGGCG
CCGGGCCGCG GCCTCGCCGG CAATTATTTC TTCAATTATC CGATCGGCCA ATGGGGCACG
CGGGTGCGCT TCAACGCGCC GGAAGCCTAT TTCACCCTGG CGGCCTATCA GATGAACCCC
AACGTCTTGA AACAAAGCTA TGGGGTGAAT TTCGATTTCA GCGGCGGCAA CGGGGTCCTG
CTGCCGATCG AATTCGGCTG GCTGCCGGCT TTTGATGGAG GCCGTCTGCC CGGTGTCTAC
CAATTCACCG CCTGGTATGG CTCGCAGCAG GCTCAGGACG TCGTGGCCCT CAATTATCCG
AATCTCGTGC CGCTCAGCGA TCTGCCGGTG GGTGGCCGCT GGGGCGTGAG CTTCCAGATG
TCGCAGCAGC TCACGCATCC TTCCGATGAT CATCCCAAAC AGGGCCTGAG CCTGATCGGC
AGCATGGTGA TGCTTGATCG GGCGACCTCG ACGCTCAACA ACCAAGAGAC CATCGGCCTC
GTCTATCACG GACCGTTCGA GAACCGTCAG GGCGATGAAA TCGCCATTGC CTGGGGCCGC
ACGGAGGTCA ATTCGCGCCT GACCAATGCC GCGATCCTGT CCAATGTCCT CGTGCCTGGC
TCAGCCGTCG TGCGACGCGC CGAATATCCC TTGGAAATCT ACTACAACTT CCATGCCTAT
AACGGCATCG ATGTGCGTCC GAACTTCCAA TGGATTCACT GCCCAGGTGG TGTTTGTAAC
AAACCGGATG TGGCCATCCT CGGTGTGAAA ACTGTCATTA ATTTCTGA
 
Protein sequence
MASKKAGRQL LRATRIAGIL ALGFGLTQGG TAARAADVAP PAQVAVSPAP PVPEHDWALG 
TWGGVRSDLY RKGIDFQFVW VSEVAYNMTG GAENRIAQAG QLNLGVTFDL EKLFGDPGAI
FQMTFDKREG RNLNHDAGLD MLVQPQEVYG RGDIWRLTQF WYDQKFANGV IDWKIGKMAV
SEDITQYPCV FMNLSFCGSA PGRGLAGNYF FNYPIGQWGT RVRFNAPEAY FTLAAYQMNP
NVLKQSYGVN FDFSGGNGVL LPIEFGWLPA FDGGRLPGVY QFTAWYGSQQ AQDVVALNYP
NLVPLSDLPV GGRWGVSFQM SQQLTHPSDD HPKQGLSLIG SMVMLDRATS TLNNQETIGL
VYHGPFENRQ GDEIAIAWGR TEVNSRLTNA AILSNVLVPG SAVVRRAEYP LEIYYNFHAY
NGIDVRPNFQ WIHCPGGVCN KPDVAILGVK TVINF