| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2823 |
|---|
| Symbol | |
|---|
| ID | 6199156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 3216653 |
|---|
| End bp | 3218188 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641706770 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001833881 |
|---|
| Protein GI | 182679735 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAG GCCAGCTTCA TGCCGCCGAG AGCCATGCAC CGCTCATGGC CACGGACTAT
CTTCTGACCG CAGAGAACAT CCGCAAGGAG TTTCCAGGTG TTCTCGCGCT GGACGGCGTG
GAGCTCAAAC TGCGCCGGTC CTCCGTCCAT GCTCTGATGG GAGAGAATGG CGCTGGCAAA
TCCACGCTGA TGAAGATCAT CGCCGGTATC TACAAGCCGG ACGCCGGACG GATCCGTCTC
AAAGGGAACG AAATTTCCTT TCAGTCGCCG CTCGACGCCT TGGAAAGCGG TATCTCGATG
ATTCATCAGG AACTCAATCT GATGGATTAC ATGACGGTGG CGGAAAATAT CTGGATCCGC
CGGGAGCCGC TCAATCGTTT CGGCTTTGTC GACCACGACG AGATGCGGCG CATGACGCAA
GCCCTGTTCA GACGCCTCAG GATCGATCTT GACCCCGATG CCGAGGTGCG TGACCTGAGC
GTCGCCAACC GCCAGATCGT GGAGATCGCC AAGGCCGTTT CCTATGGGTC GGACGTGCTG
ATCATGGACG AACCGACGTC CGCTCTGACG GAGCGGGAAG TCGACCATCT CTTCGAGATC
ATCCGTGACC TGCGGGCTCA AGGCATAGGG ATAGTCTATA TCACGCACAA GATGAACGAG
CTTTTCGAGA TTGCTGATGA GTTCTCCATC TTTCGCGACG GCCGTTATAT TTCGACGCAT
GCGGCCTGCG ATGTCACGTG TGATGACATC ATCCGCATGA TGGTCGGCCG TGAGCTGACA
CAGATGTTCC CGAAGGAAGA AGTACCGATC GGTGACGTCG CCCTGTCGGT CAAAAACGTC
GGGCTCGACG GTGTGTTCCA GGGCGTGAAT TTCGATCTGC GTGCCGGTGA GATCCTCGGC
ATCGCCGGTC TCATTGGGTC TGGCCGTTCC AGCCTCGCGG CGACTCTGTT TGGTGTCACC
CCCGCAACCT CCGGCTCCAT CGCCATTGCT GGAAACGATG TTGTCATTGA TTCCCCCGCG
ACGGCGATGC GGCATCAAAT GGCTTTCCTG ACCGAGGATC GCAAGGTCAG CGGTTGTCTT
TTGAGCCTCA GCATTCTGGA GAACCTGCAA CTCGCCGTGC TGCAGGACAA ATATGTCACG
AACGGTTTCG TGCATGAAAA GGAACTGTTT TCCGCCTGTG ATGAGATGGC GCGTAAGCTG
CGAGTCAAGA CGCCAAATCT GCAGGAGATT ATCGGCAATC TGTCCGGCGG CAATCAGCAG
AAGGTTCTGA TCGGCCGCTG GCTGCTCAAC AAGCCGCGCA TCCTCATTCT GGACGAACCG
ACCCGCGGTA TTGATGTCGG CGCGAAAGCC GAGATTCACC GGCTGGTGAC CGAACTTGCG
CGCGAAGGTG TCGCCATCAT TTTGATCTCG TCCGAAATGC CGGAGGTTCT CGGCATGAGT
GATCGCATCA TGGTCATGCA CGAAGGGCGT ATGACCGGAA TTCTCGATCG GTCCGAGGCG
ACCCAGGTAA AGATCATGGA GCTCGCCTCC CGATGA
|
|---|
| Protein sequence | MTTGQLHAAE SHAPLMATDY LLTAENIRKE FPGVLALDGV ELKLRRSSVH ALMGENGAGK
STLMKIIAGI YKPDAGRIRL KGNEISFQSP LDALESGISM IHQELNLMDY MTVAENIWIR
REPLNRFGFV DHDEMRRMTQ ALFRRLRIDL DPDAEVRDLS VANRQIVEIA KAVSYGSDVL
IMDEPTSALT EREVDHLFEI IRDLRAQGIG IVYITHKMNE LFEIADEFSI FRDGRYISTH
AACDVTCDDI IRMMVGRELT QMFPKEEVPI GDVALSVKNV GLDGVFQGVN FDLRAGEILG
IAGLIGSGRS SLAATLFGVT PATSGSIAIA GNDVVIDSPA TAMRHQMAFL TEDRKVSGCL
LSLSILENLQ LAVLQDKYVT NGFVHEKELF SACDEMARKL RVKTPNLQEI IGNLSGGNQQ
KVLIGRWLLN KPRILILDEP TRGIDVGAKA EIHRLVTELA REGVAIILIS SEMPEVLGMS
DRIMVMHEGR MTGILDRSEA TQVKIMELAS R
|
|---|
| |