Gene Bind_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_2812 
Symbol 
ID6201517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3201587 
End bp3204685 
Gene Length3099 bp 
Protein Length1032 aa 
Translation table11 
GC content57% 
IMG OID641706759 
Productbifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_001833870 
Protein GI182679724 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.616063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCA GTTCGACATT CCTTCCTTTT TCAGCGCCTT ATGCGCCTGC CGACGAGGCA 
ATTGCCGAAG ACCTGCTGAG GCAGGTCGAA TGTGACAAGG CCGTGCAAGC AAGGATTGAT
GCCCGGGCAA CACGGCTCGT CCAGGCCGTT CGCGCGCGCG CGTCGCGTCT TGGTGGTCTC
GATGATCTCT TGCGCGAATA TTCTCTTTCG ACGCAGGAAG GTCTGGCCTT GATGGTGTTG
GCGGAAGCCT TGCTGCGCGT GCCGGACGAT GCCACCGCTG ATCGATTGAT CGCCGACAAG
CTCGCGTCCT TTCACGAGCA TCGGAACCCT GCCGGGCAGG ATCCTCTTTT GGTGAGCATG
GCCGATTGGG CGCTTGGCGC CTCCGCGCAT GTCCTGACGG CTGGCCGATC GATGGAGGGG
CTCGTCGCTT TTCTCGCCCG GCGGCTTGGA CCGACGACGA TCCGGATCGC GGCGCGCCGC
GCGATGCAGG TCCTTGGCAA TCATTTCGTG CTTGGCCGTA CGATCGAGGA AGGGCTGGCC
AGGGCACATC TTGATCGCAG CGAAAATTTC TATTCCTTCG ACATGCTGGG GGAAGGCGCG
CGCACTGCTG ACGATGCCGC GCTCTATTAT GACGCCTATG CCCAGGCGAT CGGGCGTTTG
GGGCAGCGCG CCGGGACAAG GCCTTTGCCG GCCCGACCGG GCATTTCTGT CAAACTTTCT
GCCCTGCATC CCCGTTATGA AGCGCGCAAA CGCACCACGA TTTTGCCCGA ACTGCTGCCG
CGCATCAGCC AATTAGCCCG GCTCGCCAAA ACCCATGATC TGAATTTCAC GATAGATGCC
GAAGAAGCCG ACCGGCTCGA ATTCTCGCTC GATCTTGTCG ATGCCTTGTT GCGTGACCCG
GACCTTGCGG GTTGGAAAGG GTTTGGCCTC GCGGTGCAAG CCTATCAGAA ACGCGCGGGG
ACCGTGATCG ACCATGTCGT GACAAGCGCG CGCCAGCAGG GTCGACAGAT CATGGTCAGG
CTGGTCAAAG GCGCTTATTG GGATACGGAA ATTAAGCGTG CTCAAGAGCG TGGCCTTGCC
GATTATCCAG TCTTTACCCG CAAGGCCATG ACGGATTTGA ATTATATTGC TTGTGCCAAG
CTTTTGCTTG CGGCGCGTGA TTGTGTCTAT CCACAATTTG CCACGCATAA TGCCCTGACA
ATCGCCACGA TTATCGAACT CGCCACGGGG GCTGGTGCTT ATGAATTTCA GCGCCTCCAA
GGCATGGGCG AAGATCTCTA TACAGCCTTG CGGGAAGACA GGTCGGACAG CCGTTGCCGT
GTCTATGCGC CAATTGGGGC GCATGAACAT CTGCTTCCTT ATCTCGTGCG CAGACTTCTG
GAGAATGGGG CCAATTCCTC CTTCGTATCG CGGATCGGTG ATCCGAATGT GCCAGTCAAG
GATCTGCTCA TCCGCCCTCA AACTGTGATC GGGCAAGCGG CCAATGCAAG ATCTCAGCAT
CTTCCTTTGC CGTGCGATCT CCATGCGCCT GACCGAAAAA CAGCGCAAGG GCTTGAATTT
GGGGACAGAA AATCGGTGAC GGTACTGCTG CGTCGAATTG GCGAGACGCG TTCGGCCTTG
CAGTCCGCGC GGGGCCACAA GAGAACTCCC CGGACAGGGG ATGTCTTGCT CGTTTCTTCA
CCCATTGATG GCACGATCAT CGGGGAAGTG AATGAAGCGC AGCGTGATCT CTTGCCGGAC
ATCCTCCGCG TGGCCAAGGA GGGGTTTCGC GTATGGTCGC GGACACCCGT GCGCGAACGG
GCAGCTTGCC TTGATCGCTG CGCGGCACGT CTCGTGGCCG AGGCGCCCGA GATCCTGTGC
TTGCTCCAGA AAGAAGCCGG TAAAACGCTC GAAGATGCTG TGGGTGAATG GCGGGAGGCG
ATCGACTTCT GCCGCTATTA CGCGGCCGAA GCCCGGCATC ATCTTAGCGA CGGTGTATTC
ATGCCGGGAC CCACGGGAGA ACAGAACCAG CTTCGCAAAC TGGGCCGTGG TGTTTTCGTT
TGTATCAGTC CATGGAATTT TCCTTTGTCG ATCTTCCTTG GCCAGGTCGC GGCGGCCCTT
GTCGCGGGAA ATAGCGTTCT CGCCAAACCC GCCGAACAAA CACCGTTGAT CGCCGCTAAA
ATCGTAGCCC TTCTACATGA CTGCGGTGTT CCTGCGTCGG TGCTGCATGT GCTTCAAGGT
GACGGCAAGA TTGGCGAAGC GCTTGTCGCC TTGCCGGACA TTGCAGGCGT CGCTTTCACT
GGGTCGAGCG CGGTGGCCTC CCATATTAAT CGCGCCTTGG CGGCCAAGCA GGGGCCGATT
GCATGTCTGA TCGCGGAAAC TGGCGGAATC AATGCGATGA TCGTCGATGC GACAGCGCAA
TTGGAACAGG TTTGCGATGA TGTTCTGACC TCGGCTTTTC GTTCGGCGGG CCAGAGGTGT
TCATCTTTGC GATTGCTTTG CTTACAGGAG GAGATTGCCG ATGATGCTTT GAGCCTGATC
CGTGGTGGAG TTGAGGAATT GTCTGTTGAT GATCCATTGG ATCTCGGTAC GGATATCGGA
CCGATCATCG ATGCGTCAGC CCATCGAACA TTGACAGACC ATATTGAAAT GATGCGGCGA
GAGAAGCGGC TTCTCTGTCA CGGAAAAGTG TCGGCCGGCG CGCCCAAGGC GGGCTTTTAT
CTTGCTCCCC ATATTATCGA GTTGAAGCGA GCCGAGGATC TAGACCGAGA GGTTTTTGGG
CCAATCCTGC ATGTCGTGCG CTATAAAAAT GAGGATCTGA GCAAACTTCT CGATGAGCTC
GAAGACAAGG GATATGGTCT GACGATGGGG ATCCATTCCC GTATCAACGC AACGATCGAA
CAAATCTGCG CGCGCAGGCT CGCGGGAAAT GTCTACATCA ATCGCAATAT GATCGGTGCC
GTGGTGGGGA CCCAGCCTTT TGGGGGATTT GGTCTCTCGG GTACGGGGCC GAAGGCCGGG
GGCCCTTCCT ATCTCGATCG ATTTTGCGTC GAAACAATTG TCACGACCAA TATGACCGCG
GTCGGTGGGG ACATTAAACT CATCAATTCC TTGTCTTGA
 
Protein sequence
MTSSSTFLPF SAPYAPADEA IAEDLLRQVE CDKAVQARID ARATRLVQAV RARASRLGGL 
DDLLREYSLS TQEGLALMVL AEALLRVPDD ATADRLIADK LASFHEHRNP AGQDPLLVSM
ADWALGASAH VLTAGRSMEG LVAFLARRLG PTTIRIAARR AMQVLGNHFV LGRTIEEGLA
RAHLDRSENF YSFDMLGEGA RTADDAALYY DAYAQAIGRL GQRAGTRPLP ARPGISVKLS
ALHPRYEARK RTTILPELLP RISQLARLAK THDLNFTIDA EEADRLEFSL DLVDALLRDP
DLAGWKGFGL AVQAYQKRAG TVIDHVVTSA RQQGRQIMVR LVKGAYWDTE IKRAQERGLA
DYPVFTRKAM TDLNYIACAK LLLAARDCVY PQFATHNALT IATIIELATG AGAYEFQRLQ
GMGEDLYTAL REDRSDSRCR VYAPIGAHEH LLPYLVRRLL ENGANSSFVS RIGDPNVPVK
DLLIRPQTVI GQAANARSQH LPLPCDLHAP DRKTAQGLEF GDRKSVTVLL RRIGETRSAL
QSARGHKRTP RTGDVLLVSS PIDGTIIGEV NEAQRDLLPD ILRVAKEGFR VWSRTPVRER
AACLDRCAAR LVAEAPEILC LLQKEAGKTL EDAVGEWREA IDFCRYYAAE ARHHLSDGVF
MPGPTGEQNQ LRKLGRGVFV CISPWNFPLS IFLGQVAAAL VAGNSVLAKP AEQTPLIAAK
IVALLHDCGV PASVLHVLQG DGKIGEALVA LPDIAGVAFT GSSAVASHIN RALAAKQGPI
ACLIAETGGI NAMIVDATAQ LEQVCDDVLT SAFRSAGQRC SSLRLLCLQE EIADDALSLI
RGGVEELSVD DPLDLGTDIG PIIDASAHRT LTDHIEMMRR EKRLLCHGKV SAGAPKAGFY
LAPHIIELKR AEDLDREVFG PILHVVRYKN EDLSKLLDEL EDKGYGLTMG IHSRINATIE
QICARRLAGN VYINRNMIGA VVGTQPFGGF GLSGTGPKAG GPSYLDRFCV ETIVTTNMTA
VGGDIKLINS LS