Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2812 |
Symbol | |
ID | 6201517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 3201587 |
End bp | 3204685 |
Gene Length | 3099 bp |
Protein Length | 1032 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641706759 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001833870 |
Protein GI | 182679724 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.616063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCA GTTCGACATT CCTTCCTTTT TCAGCGCCTT ATGCGCCTGC CGACGAGGCA ATTGCCGAAG ACCTGCTGAG GCAGGTCGAA TGTGACAAGG CCGTGCAAGC AAGGATTGAT GCCCGGGCAA CACGGCTCGT CCAGGCCGTT CGCGCGCGCG CGTCGCGTCT TGGTGGTCTC GATGATCTCT TGCGCGAATA TTCTCTTTCG ACGCAGGAAG GTCTGGCCTT GATGGTGTTG GCGGAAGCCT TGCTGCGCGT GCCGGACGAT GCCACCGCTG ATCGATTGAT CGCCGACAAG CTCGCGTCCT TTCACGAGCA TCGGAACCCT GCCGGGCAGG ATCCTCTTTT GGTGAGCATG GCCGATTGGG CGCTTGGCGC CTCCGCGCAT GTCCTGACGG CTGGCCGATC GATGGAGGGG CTCGTCGCTT TTCTCGCCCG GCGGCTTGGA CCGACGACGA TCCGGATCGC GGCGCGCCGC GCGATGCAGG TCCTTGGCAA TCATTTCGTG CTTGGCCGTA CGATCGAGGA AGGGCTGGCC AGGGCACATC TTGATCGCAG CGAAAATTTC TATTCCTTCG ACATGCTGGG GGAAGGCGCG CGCACTGCTG ACGATGCCGC GCTCTATTAT GACGCCTATG CCCAGGCGAT CGGGCGTTTG GGGCAGCGCG CCGGGACAAG GCCTTTGCCG GCCCGACCGG GCATTTCTGT CAAACTTTCT GCCCTGCATC CCCGTTATGA AGCGCGCAAA CGCACCACGA TTTTGCCCGA ACTGCTGCCG CGCATCAGCC AATTAGCCCG GCTCGCCAAA ACCCATGATC TGAATTTCAC GATAGATGCC GAAGAAGCCG ACCGGCTCGA ATTCTCGCTC GATCTTGTCG ATGCCTTGTT GCGTGACCCG GACCTTGCGG GTTGGAAAGG GTTTGGCCTC GCGGTGCAAG CCTATCAGAA ACGCGCGGGG ACCGTGATCG ACCATGTCGT GACAAGCGCG CGCCAGCAGG GTCGACAGAT CATGGTCAGG CTGGTCAAAG GCGCTTATTG GGATACGGAA ATTAAGCGTG CTCAAGAGCG TGGCCTTGCC GATTATCCAG TCTTTACCCG CAAGGCCATG ACGGATTTGA ATTATATTGC TTGTGCCAAG CTTTTGCTTG CGGCGCGTGA TTGTGTCTAT CCACAATTTG CCACGCATAA TGCCCTGACA ATCGCCACGA TTATCGAACT CGCCACGGGG GCTGGTGCTT ATGAATTTCA GCGCCTCCAA GGCATGGGCG AAGATCTCTA TACAGCCTTG CGGGAAGACA GGTCGGACAG CCGTTGCCGT GTCTATGCGC CAATTGGGGC GCATGAACAT CTGCTTCCTT ATCTCGTGCG CAGACTTCTG GAGAATGGGG CCAATTCCTC CTTCGTATCG CGGATCGGTG ATCCGAATGT GCCAGTCAAG GATCTGCTCA TCCGCCCTCA AACTGTGATC GGGCAAGCGG CCAATGCAAG ATCTCAGCAT CTTCCTTTGC CGTGCGATCT CCATGCGCCT GACCGAAAAA CAGCGCAAGG GCTTGAATTT GGGGACAGAA AATCGGTGAC GGTACTGCTG CGTCGAATTG GCGAGACGCG TTCGGCCTTG CAGTCCGCGC GGGGCCACAA GAGAACTCCC CGGACAGGGG ATGTCTTGCT CGTTTCTTCA CCCATTGATG GCACGATCAT CGGGGAAGTG AATGAAGCGC AGCGTGATCT CTTGCCGGAC ATCCTCCGCG TGGCCAAGGA GGGGTTTCGC GTATGGTCGC GGACACCCGT GCGCGAACGG GCAGCTTGCC TTGATCGCTG CGCGGCACGT CTCGTGGCCG AGGCGCCCGA GATCCTGTGC TTGCTCCAGA AAGAAGCCGG TAAAACGCTC GAAGATGCTG TGGGTGAATG GCGGGAGGCG ATCGACTTCT GCCGCTATTA CGCGGCCGAA GCCCGGCATC ATCTTAGCGA CGGTGTATTC ATGCCGGGAC CCACGGGAGA ACAGAACCAG CTTCGCAAAC TGGGCCGTGG TGTTTTCGTT TGTATCAGTC CATGGAATTT TCCTTTGTCG ATCTTCCTTG GCCAGGTCGC GGCGGCCCTT GTCGCGGGAA ATAGCGTTCT CGCCAAACCC GCCGAACAAA CACCGTTGAT CGCCGCTAAA ATCGTAGCCC TTCTACATGA CTGCGGTGTT CCTGCGTCGG TGCTGCATGT GCTTCAAGGT GACGGCAAGA TTGGCGAAGC GCTTGTCGCC TTGCCGGACA TTGCAGGCGT CGCTTTCACT GGGTCGAGCG CGGTGGCCTC CCATATTAAT CGCGCCTTGG CGGCCAAGCA GGGGCCGATT GCATGTCTGA TCGCGGAAAC TGGCGGAATC AATGCGATGA TCGTCGATGC GACAGCGCAA TTGGAACAGG TTTGCGATGA TGTTCTGACC TCGGCTTTTC GTTCGGCGGG CCAGAGGTGT TCATCTTTGC GATTGCTTTG CTTACAGGAG GAGATTGCCG ATGATGCTTT GAGCCTGATC CGTGGTGGAG TTGAGGAATT GTCTGTTGAT GATCCATTGG ATCTCGGTAC GGATATCGGA CCGATCATCG ATGCGTCAGC CCATCGAACA TTGACAGACC ATATTGAAAT GATGCGGCGA GAGAAGCGGC TTCTCTGTCA CGGAAAAGTG TCGGCCGGCG CGCCCAAGGC GGGCTTTTAT CTTGCTCCCC ATATTATCGA GTTGAAGCGA GCCGAGGATC TAGACCGAGA GGTTTTTGGG CCAATCCTGC ATGTCGTGCG CTATAAAAAT GAGGATCTGA GCAAACTTCT CGATGAGCTC GAAGACAAGG GATATGGTCT GACGATGGGG ATCCATTCCC GTATCAACGC AACGATCGAA CAAATCTGCG CGCGCAGGCT CGCGGGAAAT GTCTACATCA ATCGCAATAT GATCGGTGCC GTGGTGGGGA CCCAGCCTTT TGGGGGATTT GGTCTCTCGG GTACGGGGCC GAAGGCCGGG GGCCCTTCCT ATCTCGATCG ATTTTGCGTC GAAACAATTG TCACGACCAA TATGACCGCG GTCGGTGGGG ACATTAAACT CATCAATTCC TTGTCTTGA
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Protein sequence | MTSSSTFLPF SAPYAPADEA IAEDLLRQVE CDKAVQARID ARATRLVQAV RARASRLGGL DDLLREYSLS TQEGLALMVL AEALLRVPDD ATADRLIADK LASFHEHRNP AGQDPLLVSM ADWALGASAH VLTAGRSMEG LVAFLARRLG PTTIRIAARR AMQVLGNHFV LGRTIEEGLA RAHLDRSENF YSFDMLGEGA RTADDAALYY DAYAQAIGRL GQRAGTRPLP ARPGISVKLS ALHPRYEARK RTTILPELLP RISQLARLAK THDLNFTIDA EEADRLEFSL DLVDALLRDP DLAGWKGFGL AVQAYQKRAG TVIDHVVTSA RQQGRQIMVR LVKGAYWDTE IKRAQERGLA DYPVFTRKAM TDLNYIACAK LLLAARDCVY PQFATHNALT IATIIELATG AGAYEFQRLQ GMGEDLYTAL REDRSDSRCR VYAPIGAHEH LLPYLVRRLL ENGANSSFVS RIGDPNVPVK DLLIRPQTVI GQAANARSQH LPLPCDLHAP DRKTAQGLEF GDRKSVTVLL RRIGETRSAL QSARGHKRTP RTGDVLLVSS PIDGTIIGEV NEAQRDLLPD ILRVAKEGFR VWSRTPVRER AACLDRCAAR LVAEAPEILC LLQKEAGKTL EDAVGEWREA IDFCRYYAAE ARHHLSDGVF MPGPTGEQNQ LRKLGRGVFV CISPWNFPLS IFLGQVAAAL VAGNSVLAKP AEQTPLIAAK IVALLHDCGV PASVLHVLQG DGKIGEALVA LPDIAGVAFT GSSAVASHIN RALAAKQGPI ACLIAETGGI NAMIVDATAQ LEQVCDDVLT SAFRSAGQRC SSLRLLCLQE EIADDALSLI RGGVEELSVD DPLDLGTDIG PIIDASAHRT LTDHIEMMRR EKRLLCHGKV SAGAPKAGFY LAPHIIELKR AEDLDREVFG PILHVVRYKN EDLSKLLDEL EDKGYGLTMG IHSRINATIE QICARRLAGN VYINRNMIGA VVGTQPFGGF GLSGTGPKAG GPSYLDRFCV ETIVTTNMTA VGGDIKLINS LS
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