Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2749 |
Symbol | sdhA |
ID | 6200394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 3133547 |
End bp | 3135385 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641706698 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001833810 |
Protein GI | 182679664 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTTA ACGGATCATC GAACGGAACC GCGGCGCCGG CCTATAACGG GACCGCTTAT CCGATCACCG ATCATACGTT CGATGTGGTT ATCGTCGGTG CAGGCGGGGC TGGTCTTCGC GCGACCGTGG GATGTTCCCA GGCGGGGCTT CGCACGGCCT GTATTTCCAA GGTTTTCCCG ACCCGTTCGC ATACGGTCGC GGCGCAGGGC GGTGTCGCCG CCTCGCTCGC CAATATGGGG CCGGACAATT GGAAATGGCA CATGTACGAT ACCGTCAAGG GATCGGACTG GCTGGGCGAT CAGGATTCCA TCGAATATCT CTGCCGCAAT GCGCCGGCAG CCGTGTTCGA GCTCGAACAC TGGGGCGTGC CGTTTTCGCG CACGGAAGAC GGCCGTATCT ATCAGCGGCC CTTCGGCGGT ATGACCACGG ATTTCGGCAA GGGTCCGCCG GCACAGCGGA CTTGCGCGGC TGCTGACCGC ACAGGCCATG CCATTCTGCA TACGCTTTAT GGGCAGGCCC TGCGTAACCA AACCGAATTC TTCATCGAAT ATTTCGCCAT CGATCTAATC ATGGAAGATG GCCATTGCCG TGGTGTCGTC TGTCTCAAGC TCGATGATGG CACGATTCAC CGTTTCCGTT CCCAGCTCGT GATTCTCGCG ACGGGTGGCT ATGGCCGCGC TTATTTCTCG GCGACATCCG CCCATACCTG CACGGGCGAC GGCAATGCCA TGGTGCTGCG TGCTGGTCTG CCGCTGCAGG ATATGGAATT CGTGCAATTC CATCCGACTG GCATCTATGG CGCGGGTTGC CTGATCACCG AAGGCGCGCG CGGCGAAGGC GGTTATCTGA CCAATTCGTC AGGTGAGCGT TTCATGGAAC GCTATGCGCC GTCGGTGAAG GATCTGGCGC CCCGCGACAT GGTTTCGCGC GCTATGACGA TGGAGATCCG CGAAGGCCGT GGCGTCGGTA AGGGCAAGGA TCACATCTTT CTTCATCTCG ACCATCTCGA CCCGAAAATC CTGCATGAGC GGCTCCCCGG CATTTCGGAA AGCGCCAGGA TCTTCGCGGG CGTCGATGTC ACGAAGGAGC CGATCCCGGT TCTGCCGACC GTCCATTATA ACATGGGCGG CATCCCGACG AATTATCACG GCGAAGTCGT CATCAAGAAG GGTGATGATC CAGATGTCGT CGTGCCGGGC TTGATGGCGC TTGGCGAGGC GGCTTGCGTG TCCGTACACG GCGCCAATCG TCTTGGCTCG AATTCGCTGA TCGATCTGGT GGTTTTCGGC CGCGCCGCGG GCCTCCGTGC CGCCGAGATC GTAACGGCCG GTGCGAAACA GCCGGAACTT CCGGCCGGTT CTGCTGATCT TTCGCTCTCC CGCCTCGATC ATTTCCGCAA TGCCAAGGGC TCGTTGCCCA CCGCTGAACT GCGGTTGCGG ATGCAGAAGG TCATGCAAAA TAATTGCGCG GTCTACCGGA CCGGCGAGAC CCTGGAAGAA GGCTCCAAGC TCATCCATGA AGTCTGGAAG GCTAAGGATC AAATCGGTGT GACGGATCGC GGTTTGATCT GGAATACAGA TCTGATCGAG ACCTTGGAAT TCGATAATCT GATCGTGCAG GCCGTCGTCA CAATGGATGG CGCGGTCAAC CGCACGGAAT CACGTGGTGC CCATGCGCGT GAGGATTATG CCGAGCGCGA TGACAAGAAC TGGATGAAAC ATACATTGGC CTCGATCGAT GGCACGGCCC ATACGGTGAG CCTCGATTAC CGGCCGGTGC ATAATTACAC CATGACCAAC GAGATGCAGT ATATTGAGCC CAAGGCGCGT GTTTATTGA
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Protein sequence | MALNGSSNGT AAPAYNGTAY PITDHTFDVV IVGAGGAGLR ATVGCSQAGL RTACISKVFP TRSHTVAAQG GVAASLANMG PDNWKWHMYD TVKGSDWLGD QDSIEYLCRN APAAVFELEH WGVPFSRTED GRIYQRPFGG MTTDFGKGPP AQRTCAAADR TGHAILHTLY GQALRNQTEF FIEYFAIDLI MEDGHCRGVV CLKLDDGTIH RFRSQLVILA TGGYGRAYFS ATSAHTCTGD GNAMVLRAGL PLQDMEFVQF HPTGIYGAGC LITEGARGEG GYLTNSSGER FMERYAPSVK DLAPRDMVSR AMTMEIREGR GVGKGKDHIF LHLDHLDPKI LHERLPGISE SARIFAGVDV TKEPIPVLPT VHYNMGGIPT NYHGEVVIKK GDDPDVVVPG LMALGEAACV SVHGANRLGS NSLIDLVVFG RAAGLRAAEI VTAGAKQPEL PAGSADLSLS RLDHFRNAKG SLPTAELRLR MQKVMQNNCA VYRTGETLEE GSKLIHEVWK AKDQIGVTDR GLIWNTDLIE TLEFDNLIVQ AVVTMDGAVN RTESRGAHAR EDYAERDDKN WMKHTLASID GTAHTVSLDY RPVHNYTMTN EMQYIEPKAR VY
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