Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2674 |
Symbol | |
ID | 6200265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 3042685 |
End bp | 3045768 |
Gene Length | 3084 bp |
Protein Length | 1027 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641706621 |
Product | HsdR family type I site-specific deoxyribonuclease |
Protein accession | YP_001833735 |
Protein GI | 182679589 |
COG category | [V] Defense mechanisms |
COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAA AGCCCCATTC TTCCATTGGC CAGACCGAGA AAAAAACCCA GGCGCGCGTC GTCGCTCTTT TCCGCGACCA GCTCGGCTAT GATTATCTTG GCAACTGGAT CGATCGCGAA AACAACCGCA ATATCGAGGA AGCCTATCTC CGGCCCTTTC TCAAAACGCG CGGATATGAC GAGGCGCTGA TCAGCCGCGC CCTTTATGAA CTCAATAAAG CCGCGACCGA TCAATCCCGC AGCCTCTACG ATGTCAATCG TTCCGTCTAT GATCTCTTGC GCTATGGCGT GAAGGTAAAG GCCGATGTGG GCGAGACGAC GCAAACCGTC TGGCTGATCG ATTGGAAGAA TTTTGCCGCC AACCATTTCG CTATCGCCGA GGAAGTGGCA GTCAAGCCCG CGAGCGCTTC CGACAAAAGC ACAGCGAAAG CCTGGGGGAA ACGCCCCGAT GTGGTGATTT ATGTCAACGG CATCGCGCTC GCCGTGCTGG AACTCAAGCG CTCGACGGTT GCGATCTCAC AAGGCATTCG CCAGAATCTC GACAACCAGA AGAAGGTTTT TATCCAACAC TTCTTCACCA CCATGCAGCT GATCATGGCG GGCAGTGACA GCGAGGGTCT GCGTTATGGC GTGATCGAAA CGCCCGAGAA ATATTATCTC GCTTGGAAGG AAGAAAGCCC GGTCCAAAAT CCTCTCGATC GCGCGCTGCT TCAACTCTGT GAAAAATCGC GTTTCCTGGA ACTGATTCAC GATTTCATTG TCTTCGACGC CGGCACGAAA AAGACCTGCC GTCAGAACCA ATATTTTGGC GTGCATGCGG CGCAAGACCA TGTTCGCCGC CGTGAAGGTG GGATCATCTG GCACACGCAA GGCTCAGGCA AAAGCCTGAC CATGGTCTGG CTCGCGAAAT GGATACGCGA GCATGTGAAG GATGCGCGCG TACTCATCAT CACCGACCGG ACCGAACTCG ACGAGCAGAT CGAGAAAGTG TTCAAGGGCA TCAATGAGGA GATCGTCCGT GCCAAAAGTG GCGCCGATCT CGTCGCCAAA CTAAACGACA CGAATCCCTG GCTTCTATGC TCGCTGATCC ACAAATTCCG TGGCAGGGAA GATGAAGAGG GTGATGTCCC CGGCTATATC GAGGAAGTCC GCGAGGCGCT GCCGAAGGAT TTCCGCGCCA AGGGCGATAT TTTTGTCTTC GTGGACGAAT GCCATCGCAC GCAAAGCGGC GCCTTGCACG ACGCTATGAA GGCTATTCTA CCGAGCGCCA TGTTCATAGG TTTCACCGGC ACGCCACTTT TGAAGGCGGA TAAGAAAACC AGTCTCGAAA TCTTTGGCCC CTATATCCAT ACCTATAAAT TCGATGAAGC GGTGAGCGAT GGCGTCGTGC TCGATCTGCG TTATGAGGCG CGCGACATCG ACCAGAACAT CACCTCGCCC ACCAAGATCG ACCAATGGTT CGCGGCCAAG ACCAAGGGAT TGACCGATCT CGCCAGGGCG CAGTTGAAAC AGCGCTGGGG CACTTTGAAG AAAGTGCTCT CGAGTCAATC GCGTTTGGAA AAAATTGTTG AAGACATCCT TCTCGATTTT GCGCTCAAGG ATCGGCTGGC GGGCGGACGC GGCAACGCGA TGCTCGTTTC ATCCAGCATT TATCAAGCGT GTAAATTCTA TGAATTGTTT GACAAGACCG AGCTCTCCAG TAAATGCGCG ATCATTACCT CCTATAAGCC GTCACCCAAT GATCTGAAAG GAGAGGACAG CGGCGAAGGT CTGACGGAGC GGTTGCGGCA ATATGAAATC TACAACAAAA TGCTTGAGGG CCGAGACCCG GAGACCTTCG AGAAGGAGGT GAAGAAAAAA TTCATCGATG AACCAGGACA GATGAAGCTT CTAATCGTGG TGGACAAGCT TCTGACCGGC TTCGATGCAC CTTCAGCGAC CTATCTCTAT ATCGACAAGC ACATGCAGGA TCATGGCCTG TTCCAGGCCA TTTGCCGCGT GAACCGTCTT GATGGGGATG ATAAGGAATA TGGCTACATC ATAGACTACA AGGATCTTTT CAAAAGCCTC GAAAGCTCGA TCAAGGATTA TACTGCCGAG GCTTTTGAAG GCTATGATAA AGCGGATGTC GCCGGCCTTT TATCCGACCG GCTTGAAAAG GCGCGCGAAA GGCTGGATGA AGCCCTCGAA GCGGTGCGCG CACTCTGTGA ACCTGTTGAA GCGCCTCGTG ACACAGCGGC TTTCCTTCAA TTCTTCTGCG CGAAAGACAC AGCCGATAAA ACCGCACTGA AGGAAAACGA ACCGAAACGG CTCACCCTCT ACAAGCTGGT CGCCTCTCTG CTGCGCGCCT ATGCCGATAT CGCGAACGAA ATGCCAGAAG CGGGCTATAG CGATGCTGAA ATCGCGGCGA TCAAGGCCGA AGTCGATCAT TTCACGCACG TCCGCGATGA AGTAAAGCTC GCAAGCGGCG ATTATATCGA TCTCAAAATG TATGAGCCGG CGATGCGGCA CCTGATCGAC ACCTATATCC GGGCAGACGA AAGCAGGCTG ATTTCCGCCT TCGACGATAT GTCGTTGGTG CAGATGATCG TCGAGCGCGG AGCGGATGCG GTGGATGCCT TGCCGAAGGG CATTCGCGAA AACAAGGAAG CCGTCGCCGA AACAATTGAA AACAATGTGC GTAAGCTTAT CATCGAAGAA ACGCCGATCA ATCCGAAATA TTATGAAACT ATGTCGGATC TTCTGGATGC GCTGATCGTT CAGCGCAAAC AGCAGGCGAT TGCCTATGAG CAATATCTCG CGGAAATCGT CGCGCTCACG AAGAAAGCGA AGAATTCAGC CACTGGAGCG ACCTATCCCA CAACGATGAA CACCGCCGCG AAACGCGCCC TCTATGATAA TCTCGGCAAG GATGAAGCCT TGGCGATAGC GATTGATGCA GACATCCGTA AGAAAAAGCA AGATGATTGG CGTGGGCATA GGGGTAAGGA GCAAATGGTG CGCAACATTA TCCGAACACA TCTCACCGAT CCGGCGCTTG TCGATCAGAT CTTCGATCTG GTGAGAAGCC AACATGAATA TTGA
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Protein sequence | MSQKPHSSIG QTEKKTQARV VALFRDQLGY DYLGNWIDRE NNRNIEEAYL RPFLKTRGYD EALISRALYE LNKAATDQSR SLYDVNRSVY DLLRYGVKVK ADVGETTQTV WLIDWKNFAA NHFAIAEEVA VKPASASDKS TAKAWGKRPD VVIYVNGIAL AVLELKRSTV AISQGIRQNL DNQKKVFIQH FFTTMQLIMA GSDSEGLRYG VIETPEKYYL AWKEESPVQN PLDRALLQLC EKSRFLELIH DFIVFDAGTK KTCRQNQYFG VHAAQDHVRR REGGIIWHTQ GSGKSLTMVW LAKWIREHVK DARVLIITDR TELDEQIEKV FKGINEEIVR AKSGADLVAK LNDTNPWLLC SLIHKFRGRE DEEGDVPGYI EEVREALPKD FRAKGDIFVF VDECHRTQSG ALHDAMKAIL PSAMFIGFTG TPLLKADKKT SLEIFGPYIH TYKFDEAVSD GVVLDLRYEA RDIDQNITSP TKIDQWFAAK TKGLTDLARA QLKQRWGTLK KVLSSQSRLE KIVEDILLDF ALKDRLAGGR GNAMLVSSSI YQACKFYELF DKTELSSKCA IITSYKPSPN DLKGEDSGEG LTERLRQYEI YNKMLEGRDP ETFEKEVKKK FIDEPGQMKL LIVVDKLLTG FDAPSATYLY IDKHMQDHGL FQAICRVNRL DGDDKEYGYI IDYKDLFKSL ESSIKDYTAE AFEGYDKADV AGLLSDRLEK ARERLDEALE AVRALCEPVE APRDTAAFLQ FFCAKDTADK TALKENEPKR LTLYKLVASL LRAYADIANE MPEAGYSDAE IAAIKAEVDH FTHVRDEVKL ASGDYIDLKM YEPAMRHLID TYIRADESRL ISAFDDMSLV QMIVERGADA VDALPKGIRE NKEAVAETIE NNVRKLIIEE TPINPKYYET MSDLLDALIV QRKQQAIAYE QYLAEIVALT KKAKNSATGA TYPTTMNTAA KRALYDNLGK DEALAIAIDA DIRKKKQDDW RGHRGKEQMV RNIIRTHLTD PALVDQIFDL VRSQHEY
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