| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2558 |
|---|
| Symbol | |
|---|
| ID | 6198933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 2921833 |
|---|
| End bp | 2922405 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641706535 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001833649 |
|---|
| Protein GI | 182679503 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGAC CCAGTCTGCG TGAAAAGATC ATCGACGCGG CCCTGGAATG TTTTCATGAG
CAAGGTTTCC TTGGATGCAG CGTCCAGGAC ATCACCGACG CCGCCGGTGC ACCCAAGGGA
TCATTCTACA ATCATTTCAA AACCAAAGAG GCTCTGGCTC TCGAAGTGTT GCAGCGTTAT
GTCGACGCAG TTCGTGTCGG TATGCTCTTC GAGGGTGATA GGCCACCACT CGAGCGATTG
CGCGCGCATT TCGAATATCT CATAGAGCGA AATAAGGATT TGGATTTTGC GCGCGGATGC
ATGATCGCCA ATTTTACTTC GGAAATGGCA GACCATTATC CAGATATGCG CACCGCCTTG
GATCACGCCA TGACGCGATG GAGCACCGCC ATCACCTCCC TATTGCGTCA GGCGCAAATC
GACGGAAAGC TCTCGCAGGC CAAGGACCCT GAACGTCTGG CGCGTTTCAT GATCTGTGCT
TGGCAGGGCA CTCTCATGCG TGCACGAATC GCCAAAATCC ACCAACCTTT CGATGATTTT
TTTGCCCTGA TCTTCGAGGA TCTGCTGGCG TGA
|
|---|
| Protein sequence | MARPSLREKI IDAALECFHE QGFLGCSVQD ITDAAGAPKG SFYNHFKTKE ALALEVLQRY
VDAVRVGMLF EGDRPPLERL RAHFEYLIER NKDLDFARGC MIANFTSEMA DHYPDMRTAL
DHAMTRWSTA ITSLLRQAQI DGKLSQAKDP ERLARFMICA WQGTLMRARI AKIHQPFDDF
FALIFEDLLA
|
|---|
| |