| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2449 |
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| Symbol | |
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| ID | 6200031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 2791097 |
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| End bp | 2794288 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641706432 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001833547 |
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| Protein GI | 182679401 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCAG AGGTTTTCGT TCAGCGTCCT CGTCTCGCGA CCGTTATCGC GATCGTTACT
GTTATTGCCG GCCTTGTCTC GCTTTTTGTC ATCCCCATCG CCCAATATCC GGACATCGTC
CCGCCGCAGG TCTCCGTGAA GACGACCTAT CCAGGCGGAT CGGCCGCCGT GGTCGAATCG
ACTGTTGCCC AGCCGATCGA GAGTCAGGTC ATCGGCGTTG ATAAGATGAT CTATATGAAG
AGCGTGAGCG GCGATGATGG CAGCTATTCA TTGATCGTTT CGTTCGAACT CGGCACCGAT
CCTGATATCA ATACTGTCAA TGTCAACAAT CGTGTCCAAG TCGCTCTGTC GAAGCTCCCT
GAAGATGTGA AGCGGCAAGG TGTTAATGTC AAGAAGCAGT CTTCCGCTTT GCTTGGCGTG
ATCGCGCTTT ATTCTCCCAA AGAGACACAT GACGAGCTGT TTATTTCGAA TTATGCCACG
ATCAACCTTT TGGATGATAT TAAAAGCACG CCTGGTGTTG GCGATGCGTT TTTATTCGCT
GCCCAAGATT ACTCTGTCCG AGCCTGGGTG AACACCGATC GGCTGACAGG TCTCGGCTTG
ACGACAGGCG ATGTCATCAA TGCGATCAAC ACGCAGAACG TTCAGGCGGC GGTTGGCCGA
ATCGGAGCGC GGCCGATTTC CAATGACCAG CAATTGCAGC TCAATATTCA GACCAAAGGT
CGTCTGACCT CGATTGACGA ATTCAAGAAG ATCGTCATTC GGACGAACCC AGACGGCTCG
ATCTTGCGGC TCGAGGACGT CGCGCGATTG GAACTCGGCG CGGCCAATCT TGATCGGTCC
ACCCGCCTCA ATGGCGGACC TGCCACTTTG ATCAGCATCT ATCAATCACC GGGTGCGAAT
GCCCTCAAGA CGCTCGATGC CGTCAAGAAA CGCCTGGAAA ATGCCGCGAA GGATTTTCCC
GAGGATCTCG CCTGGAAAGT CACTTATGAT CCGACCACTT TCGTCTCCGC GACAATCGAG
GTGGTGATCC ACACCTTGTT CGAGGCGTTT GTGCTTGTCG TGCTGGTCGT GTTCCTGTTC
CTCGGCAATT TGCGAGCGAC GCTGATCCCG ACCATTGCTG TGCCGGTCAG TTTGATCGGC
ACGTTTATCG TGCTGAATGC GATCGGCTAT TCCGCCAATA CGGTTTCGCT GCTGGCCATG
GTCCTGGCCA TCGGCATTGT GGTCGATGAT GCGATCGTCG TCGTCGAGGC GGTCGAAGCG
GTGATGGAGG AACATCCCGA ACTTACACCC GCTCAGGCTA CCATTCAGGC CATGGCGGGC
ATTACCGCGC CGATCATCGC CATCACGCTG GTGTTGCTCT CGGTCTTTGT CCCGGTCGCC
TTCATCCCGG GTATTTCCGG CGTTCTGTTC CGGCAATTCG CCGTGACGGT GGCTGTATCC
ATGGTGCTGT CGGCCATCAA TGCGCTGACG CTTTCGCCCG CGCTTTGCGC GCTTCTGCTA
CGGCCCCATC ATGGCCCTCG CCGGGGCCCC ATTGGCGTGT TGATGCGCTC CATTGACTGG
GTGCGTGACC GTTATGGCAA TGTCGTGGCT CGGCTTGTCC GCTTTTCCAT CCTCAGCCTC
GCGGTGGTCG CGGCGTCATT TTTCGGCATC TATACCCTCA GCAAGATTAC CCCGACCGGT
TTCGTCCCCG AGGAAGATCA AGGCGCTTTC TTCGTTGTGG TTCAGCTTCC CGACGGGGCT
TCGATCACCC GCTCGACGGA TGTCGTTCGC CAGGTTGAAA CCATCCTCAA GGAAGAGCAC
ACGATTGCCG ATTATTCATC GGTCGTCGGT CTGAACTTTA TCGATAATTA CTCTCAACCC
AATGCGGCTT TCGTAATCGT GACATTGAAG CCCTTCGAAG AACGCAAGGG CGAAGAAGAC
GGAGCCCCAG CGATCATTCG TCGGCTCGGT GAAAAACTGG CGCTGGTTCG TGGTGGCCGA
GCGATTCCGC TCAGTCCGCC GCCCATTATC GGCCTCGGCA CTGGCGGCGG TTTCAGCTAT
GTGCTGCGCG ATCTTGCGGG CAACAATCCG AAGTCATTGG CGCAAGTGCT GCGCGGGCTT
TTGGTCGCGG CTAATCAAGA TCCACAATTG TCGAGGGTTT TCAGCACATT TTCAGCCACG
AACCCATCCG TCTATCTCGA TATAGATCGC GATAAAGCGC AGATTCTCGG CATTGAAATC
AGCGACATTT TCCAGGCGCT TCAGGCTTCG CTCGGCGGCT TCTATGTCAA TGACATGAAC
CTTTTCGGAC GGACATGGCA GGTCCAGGTT CAGGCGGAAG CGGAAGATCG TGCGTCCGTC
GATGATATCA ACCGCATCAA TGTGCGCAAT GCTCAAGGCA AGATGGTCCC CTTGCGCAGT
CTCGTCGAGG TGCACGTCGT GGTCGGGCCT CAGGCGCTCA TCCGCTATAA CAATCGCCTT
GCAGTTACGG TCCAAGGCAG CCCGGCGCCG CGTATCTCAT CAGGCCAGGC GCTTGCCGCG
ATGGAGAGGG TCGCCGCCAA TGTCCTGCCT ACGGGTTATC GCGGCGAATG GACTGATATT
TCCTTCCAGG AGAAACGCGC CGAGGGCAAG ACACCAATCA TTCTCGCTTT TGCTGTCCTC
TTTGCTTATC TTTTCCTTGT CGCTCTCTAC GAGAGCTGGA GCATTCCTAT CTCCGTGCTT
CTCTCGGTCA CGATCGGGCT TGTCGCGGCC TTCGTCGGCA TGGTCTTGGC CGGCGTCACT
CTCGATCTCT ATGCTCAGAT CGGCATGATC GTTCTGATCG GGCTTGCCGC GAAGAATGGC
ATTCTTATCG TCGAATTCGC CAAGGAGCGG CGTGAGCATG GCGTGCCTTT GCTGGAAGCC
GCGACGGAAG GCGCACGGCT GCGTTTCCGG CCTGTGATGA TGACGTCCTT CGCTTTCATC
CTGGGGCTCG CCCCCTTGGT TTTCGGCGTC GGGGCGGCCA TGCTTGCGCG CCGTAATGTT
TCGACGGCGG TGTTCAGCGG TATGATCGGC GCGTCCTTCA TCGGCATTTT CGTCATCCCG
CCTCTCTACG TCCTGTTCCA AGGCTTGCGC GAACGGTTGA AATCACCCTC GCGTTCGAAG
GAGAAGCCGG TTGAACATTT CCCGGAAGGC GTGGTTGGCA AGCCTGATAC TGTGGCTACG
GAGAGGCGCT AA
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| Protein sequence | MISEVFVQRP RLATVIAIVT VIAGLVSLFV IPIAQYPDIV PPQVSVKTTY PGGSAAVVES
TVAQPIESQV IGVDKMIYMK SVSGDDGSYS LIVSFELGTD PDINTVNVNN RVQVALSKLP
EDVKRQGVNV KKQSSALLGV IALYSPKETH DELFISNYAT INLLDDIKST PGVGDAFLFA
AQDYSVRAWV NTDRLTGLGL TTGDVINAIN TQNVQAAVGR IGARPISNDQ QLQLNIQTKG
RLTSIDEFKK IVIRTNPDGS ILRLEDVARL ELGAANLDRS TRLNGGPATL ISIYQSPGAN
ALKTLDAVKK RLENAAKDFP EDLAWKVTYD PTTFVSATIE VVIHTLFEAF VLVVLVVFLF
LGNLRATLIP TIAVPVSLIG TFIVLNAIGY SANTVSLLAM VLAIGIVVDD AIVVVEAVEA
VMEEHPELTP AQATIQAMAG ITAPIIAITL VLLSVFVPVA FIPGISGVLF RQFAVTVAVS
MVLSAINALT LSPALCALLL RPHHGPRRGP IGVLMRSIDW VRDRYGNVVA RLVRFSILSL
AVVAASFFGI YTLSKITPTG FVPEEDQGAF FVVVQLPDGA SITRSTDVVR QVETILKEEH
TIADYSSVVG LNFIDNYSQP NAAFVIVTLK PFEERKGEED GAPAIIRRLG EKLALVRGGR
AIPLSPPPII GLGTGGGFSY VLRDLAGNNP KSLAQVLRGL LVAANQDPQL SRVFSTFSAT
NPSVYLDIDR DKAQILGIEI SDIFQALQAS LGGFYVNDMN LFGRTWQVQV QAEAEDRASV
DDINRINVRN AQGKMVPLRS LVEVHVVVGP QALIRYNNRL AVTVQGSPAP RISSGQALAA
MERVAANVLP TGYRGEWTDI SFQEKRAEGK TPIILAFAVL FAYLFLVALY ESWSIPISVL
LSVTIGLVAA FVGMVLAGVT LDLYAQIGMI VLIGLAAKNG ILIVEFAKER REHGVPLLEA
ATEGARLRFR PVMMTSFAFI LGLAPLVFGV GAAMLARRNV STAVFSGMIG ASFIGIFVIP
PLYVLFQGLR ERLKSPSRSK EKPVEHFPEG VVGKPDTVAT ERR
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