Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2397 |
Symbol | |
ID | 6201370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 2738401 |
End bp | 2739039 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641706380 |
Product | NADH (or F420H2) dehydrogenase, subunit C |
Protein accession | YP_001833497 |
Protein GI | 182679351 |
COG category | [C] Energy production and conversion |
COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.29035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAATG ATCGTCGGGA ATTGCTGCAT CAGGAATTGA CGCGGCAGGG CGAGGCGATT GGCGCGGCCC TGCCTGGAGC GATAAAAGCT GCCACGGTCG CCTTCGGTGA ATTGACCTTG ACGGTCGAAG CCGGTCGCCT GATCGAAACA ATCACTTATT TGCGTGATGA TCCGAGCGCT TTGTATGTGT CCTTCATCGA TCTGACGGCG GTGGATTATC CCTTGCGGGA ACGGCGTTTC GATGTCGTGA CGCATCTCTT ATCGCCGAAA CATAATCGCC GGATCCGCAT CAAGGTGGAA ACCGACGAGA ATACGCCCGT TCCTTCGTTG TCCTCGTTCT ATCCCGCAGC CAATTGGTTC GAACGCGAGG CTTACGACTT TTTCGGTGTC TTGTTTTCCG GCCATCCCGA CTTGCGGCGC CTGCTGACCG ATTATGGTTT CGACGGTCAT CCCCTGCGCA AGGATTTTCC GATGACCGGC TATGCCGAGG TCCGTTACGA CGACGAACAG AAGCGTGTCG TCTACGAACC CGTGCAACTG GTTCAGGAGT TCCGCAGTTT CGATTTTCTG TCTCCCTGGG AAGGCGCGAT CGACTACATC CTGCCGGGTG ATGAGAAGGT CAAACATAAT CCTCAATGA
|
Protein sequence | MDNDRRELLH QELTRQGEAI GAALPGAIKA ATVAFGELTL TVEAGRLIET ITYLRDDPSA LYVSFIDLTA VDYPLRERRF DVVTHLLSPK HNRRIRIKVE TDENTPVPSL SSFYPAANWF EREAYDFFGV LFSGHPDLRR LLTDYGFDGH PLRKDFPMTG YAEVRYDDEQ KRVVYEPVQL VQEFRSFDFL SPWEGAIDYI LPGDEKVKHN PQ
|
| |