Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2376 |
Symbol | |
ID | 6199487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 2714654 |
End bp | 2716240 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641706359 |
Product | RNA-binding S4 domain-containing protein |
Protein accession | YP_001833476 |
Protein GI | 182679330 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000179936 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA CGTCAGACGG CCGTCCTCCC CGCGCATCGG TGGGCGCGGC CCCGAGAAAG GCTGGAACCA AGCCTGGCTT TTCAAAGCCT GGTTTTTCAA AGCCTAGTCC TTCAAGGCCT GGCCCTTCAA AGCCCAGTTC CAAGCCCGGC CCTTCCGCGC CTCCGCGTCC TTCCAAGACG CAAGGGTCCA AAGTCTCTTC GTTTAAAGGT CAGAAACCGC GTTTCGCGAA GCCCGTCCTC GCGGAACAAA AGGACGCGCA AGAGCCACAA CGCATTGCCA AGGTCATGGC CCGTGCCGGG CTCTGCTCGC GCCGTGACGC GGAAGCCTGG ATCGCGGAGG GTCGCGTCAG TGTCAACGGC ACCGTCCTGA CACAACCGGG CGTGAGCGTC AGCGACGAGG ATGTGATTCT GGTCGATGGC GAAAAACTCG CTGCGCGCGG TCACACGCGG CTGTTTCTCT TCCACAAGCC GCGCGGACTG GTGACGACCA ATCATGATCC TGAAGGCCGG CCCACCGTCT TCGATTATCT GCATGAGCGC CACCCAGACA TGCCGCGCGT CCTCAGCATC GGCAGGCTCG ACATCAATAC CGAAGGGCTG TTGCTGTTGA CCAATGACGG CGGGCTTTCG CGCCTGCTCG AATTACCGAC GACCGGCTGG GTGCGCCGTT ATCGCGTGCG CGCCAAGGGC ACGACTGATC AGGCCGTGCT CGATCAATTG CGCCAGGGCA TCACCATAGA CGGCATTCAT TATGCCGGCA TGGAAGTCAC GTTCGACCGC GAGCAAGGCG CCAATAGCTG GCTCACGCTG AGCCTGCGCG AGGGCAAGAA CCGCGAGGTC AAGCGTGTGC TGGAACAGAT CGGGCTGGAG GTCAATCGCC TGATCCGCCT CTCCTTTGGA CCTTTCCAGC TTGGCGATCT GCCCGAGGGA GACGTCACAG AAGTGCGCAC CCGCGTTCTG CGCGATCAAT TAGGGCCGAG CCTCGCGGCG GCGGCGGGCG TCGATTGGAC ACGCCATGAC GAGGATGCTG CCGAACCAGC AGCCCCCGAG CGCGCGAGAA AAACACCGTC AAAGACCAGA ACAGAGGGCA AGTCCGTTAC AAAATCCCAC GGGGCAGCGC CTCGCCCTTC GTCCAGGACA TTCACGAAAG ACAAGCCGAG AGAAGACGAA CATCCAGCGC GGACGGCCAA ACCGGCACCA CGCTCACGCA AACATATTTC GCTTCTGCGT GCTGAAGACG AAAACCGCAA GGGTGCGCCC CGCAAGCGCG TCGAAGCCCA AGAAATCGCC GACCGCCATG GTCGCGTGGT CACGGTCGAA CATCGTGTGA CAGCTGGACC CACGTCAAAG AGGGCCGAAC CCGCAACGCG CAACGCAAAG CGTTTCGCTG CCGCCCATGC CGCCGCTGAG AAAGCCGAAC GCTACGCCAA ATTCGAGGCG AAAAAGGCGA AGGGTTTAGG CGGTGAAGCC CATGCATCTC GCGGCAAAGA AGGCAAGCCG AAAGGCGCTG TCCGCGGGAA ACAGGATACG CGGCCCCAGA GCCGAAAGAG CCCTGTCGGC GGCGGCAAAA GTTTCAAGAA GAATTGA
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Protein sequence | MRKTSDGRPP RASVGAAPRK AGTKPGFSKP GFSKPSPSRP GPSKPSSKPG PSAPPRPSKT QGSKVSSFKG QKPRFAKPVL AEQKDAQEPQ RIAKVMARAG LCSRRDAEAW IAEGRVSVNG TVLTQPGVSV SDEDVILVDG EKLAARGHTR LFLFHKPRGL VTTNHDPEGR PTVFDYLHER HPDMPRVLSI GRLDINTEGL LLLTNDGGLS RLLELPTTGW VRRYRVRAKG TTDQAVLDQL RQGITIDGIH YAGMEVTFDR EQGANSWLTL SLREGKNREV KRVLEQIGLE VNRLIRLSFG PFQLGDLPEG DVTEVRTRVL RDQLGPSLAA AAGVDWTRHD EDAAEPAAPE RARKTPSKTR TEGKSVTKSH GAAPRPSSRT FTKDKPREDE HPARTAKPAP RSRKHISLLR AEDENRKGAP RKRVEAQEIA DRHGRVVTVE HRVTAGPTSK RAEPATRNAK RFAAAHAAAE KAERYAKFEA KKAKGLGGEA HASRGKEGKP KGAVRGKQDT RPQSRKSPVG GGKSFKKN
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